Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.18□□□□□ -1.9
RTP4Q96DX8 AC103783.1-201ENST00000520506 373 ntBASIC3.18□□□□□ -1.9
RTP4Q96DX8 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.18□□□□□ -1.9
RTP4Q96DX8 MIR4742-201ENST00000581069 85 ntBASIC3.18□□□□□ -1.9
RTP4Q96DX8 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.18□□□□□ -1.9
RTP4Q96DX8 AC013553.2-201ENST00000604244 589 ntBASIC3.18□□□□□ -1.9
RTP4Q96DX8 CTHRC1P1-201ENST00000605383 469 ntBASIC3.18□□□□□ -1.9
RTP4Q96DX8 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.18□□□□□ -1.9
RTP4Q96DX8 MIR622-201ENST00000638396 96 ntBASIC3.18□□□□□ -1.9
RTP4Q96DX8 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RTP4Q96DX8 AC066616.2-201ENST00000559334 1481 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 MTND4P14-201ENST00000435799 1354 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RTP4Q96DX8 Y_RNA.167-201ENST00000363735 109 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 RNU6-960P-201ENST00000364056 120 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 SNORA23-201ENST00000365128 182 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 Y_RNA.378-201ENST00000365652 113 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 RNU6-1074P-201ENST00000383995 104 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 RNU6-701P-201ENST00000384059 107 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RTP4Q96DX8 AL606923.1-201ENST00000406616 190 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 RNU4-47P-201ENST00000410876 114 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 EEF1A1P40-201ENST00000412883 573 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 AL137014.1-201ENST00000420490 1226 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 PPP1R11P2-201ENST00000423543 382 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.17□□□□□ -1.9
RTP4Q96DX8 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.17□□□□□ -1.9
RTP4Q96DX8 SNORD97-201ENST00000459187 142 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.17□□□□□ -1.9
RTP4Q96DX8 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.17□□□□□ -1.9
RTP4Q96DX8 AC108078.2-201ENST00000510750 236 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.17□□□□□ -1.9
RTP4Q96DX8 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.17□□□□□ -1.9
RTP4Q96DX8 AC026801.2-201ENST00000515352 425 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 RNU2-58P-201ENST00000516403 183 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 RNU6-1073P-201ENST00000517182 106 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 SNORA31.22-201ENST00000517204 135 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 RPL7P20-201ENST00000520308 745 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 AC100870.1-201ENST00000522035 505 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 OR5D17P-201ENST00000531492 978 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 PSMA3P-201ENST00000555485 635 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 AC026464.5-201ENST00000562497 722 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.17□□□□□ -1.9
RTP4Q96DX8 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.17□□□□□ -1.9
RTP4Q96DX8 AF038458.1-201ENST00000588406 262 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 DUSP12P1-201ENST00000612874 516 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 SNHG22-203ENST00000617833 660 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 AL589994.2-201ENST00000621124 579 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.17□□□□□ -1.9
RTP4Q96DX8 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.17□□□□□ -1.9
RTP4Q96DX8 TPTEP1-208ENST00000636884 213 ntBASIC3.17□□□□□ -1.9
RTP4Q96DX8 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
RTP4Q96DX8 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
RTP4Q96DX8 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RTP4Q96DX8 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
RTP4Q96DX8 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RTP4Q96DX8 API5P2-201ENST00000397055 1498 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.16□□□□□ -1.9
RTP4Q96DX8 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.16□□□□□ -1.9
RTP4Q96DX8 RNU6-600P-201ENST00000362524 99 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 RNU6-1284P-201ENST00000363701 100 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 Y_RNA.373-201ENST00000365600 103 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 RNU6-946P-201ENST00000383878 107 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 Y_RNA.419-201ENST00000384041 102 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 AC110754.1-201ENST00000399740 601 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 SNORA11.2-201ENST00000408318 127 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 RNU2-43P-201ENST00000410306 190 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 RNU2-29P-201ENST00000410423 189 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 MTND3P8-201ENST00000412909 339 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.16□□□□□ -1.9
RTP4Q96DX8 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.16□□□□□ -1.9
RTP4Q96DX8 RNU6-329P-201ENST00000459618 107 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 RN7SL863P-201ENST00000462370 296 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 AC083904.1-201ENST00000487828 231 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 RN7SL20P-201ENST00000488827 297 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 RPL23AP55-201ENST00000498163 452 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.16□□□□□ -1.9
RTP4Q96DX8 AC117522.3-201ENST00000507974 584 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 AC104806.1-201ENST00000508720 308 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.16□□□□□ -1.9
RTP4Q96DX8 RNU1-103P-201ENST00000516502 125 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.16□□□□□ -1.9
RTP4Q96DX8 AC022690.1-201ENST00000526681 550 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.16□□□□□ -1.9
RTP4Q96DX8 AC087241.2-201ENST00000535801 324 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RTP4Q96DX8 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RTP4Q96DX8 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.16□□□□□ -1.9
RTP4Q96DX8 RPL23AP84-201ENST00000571193 464 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 AC005951.2-201ENST00000576282 495 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.16□□□□□ -1.9
RTP4Q96DX8 AC008521.1-201ENST00000587471 187 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 AC243960.4-201ENST00000600532 288 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 AC016727.1-205ENST00000605437 569 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 AC007619.2-201ENST00000605743 379 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 AL050343.2-201ENST00000607338 280 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 AP001486.3-201ENST00000615334 372 ntBASIC3.16□□□□□ -1.9
RTP4Q96DX8 MIR6130-201ENST00000619419 109 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms