Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RN7SL594P-201ENST00000470590 287 ntBASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 AC114786.4-201ENST00000508771 728 ntBASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 PSMA2P1-201ENST00000526365 646 ntBASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 MIR5583-1-201ENST00000580941 59 ntBASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 AC018638.8-201ENST00000588755 281 ntBASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 AC011712.1-201ENST00000588959 234 ntBASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 AC006557.5-201ENST00000603126 811 ntBASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 U6.98-201ENST00000637157 84 ntBASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 AC091152.2-201ENST00000591628 2569 ntBASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 SRP72P2-201ENST00000344851 1979 ntBASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 RNU6-1127P-201ENST00000384580 107 ntBASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 AL162578.1-201ENST00000406202 378 ntBASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 AC007390.1-201ENST00000415722 356 ntBASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 RPL23AP69-201ENST00000431134 458 ntBASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 AL356535.1-201ENST00000440335 398 ntBASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 HMGN2P26-201ENST00000463169 339 ntBASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 AC109925.1-201ENST00000478069 331 ntBASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 AL049830.2-201ENST00000480072 201 ntBASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 AC010486.1-201ENST00000511793 424 ntBASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 RN7SKP209-201ENST00000516888 304 ntBASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 NARSP2-201ENST00000518524 679 ntBASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 SYF2P1-201ENST00000550658 413 ntBASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 BRDTP1-201ENST00000605735 677 ntBASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 AC093913.1-201ENST00000614178 329 ntBASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 AC063943.3-201ENST00000615562 356 ntBASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 AF117829.1-206ENST00000621883 3802 ntBASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM43Q96BQ3 CEP170P1-201ENST00000502249 4587 ntBASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 RNA5SP432-201ENST00000362480 116 ntBASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 RNU6-715P-201ENST00000365204 103 ntBASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 RNU6-393P-201ENST00000384475 107 ntBASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 MIR325-201ENST00000385260 98 ntBASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 SNORD70.1-201ENST00000391007 85 ntBASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 SNORA48.8-201ENST00000391324 134 ntBASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 AL591034.1-201ENST00000407447 340 ntBASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 AC012498.1-201ENST00000424037 437 ntBASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 UBE2D3P2-201ENST00000424409 445 ntBASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 NEK4P1-201ENST00000433383 879 ntBASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 AL512844.2-201ENST00000433990 593 ntBASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 RPS29P31-201ENST00000446147 164 ntBASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 AC008264.1-201ENST00000447612 367 ntBASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 RPS15AP27-201ENST00000449183 343 ntBASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 AC007547.1-201ENST00000462177 490 ntBASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 MTCO2P30-201ENST00000503662 364 ntBASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 MTCO3P9-201ENST00000506989 781 ntBASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 HMGB3P15-201ENST00000507326 574 ntBASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 RNU6-1315P-201ENST00000517187 99 ntBASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 MIR5692A1-201ENST00000580523 69 ntBASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 MIR3945-201ENST00000581853 98 ntBASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 U2.17-201ENST00000611454 95 ntBASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 HSPA8P4-201ENST00000511877 1920 ntBASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.68□□□□□ -1.82
TRIM43Q96BQ3 FAM35BP-202ENST00000497389 3337 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 Y_RNA.100-201ENST00000363141 102 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 Y_RNA.279-201ENST00000364763 95 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 RNU6-434P-201ENST00000384376 107 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 AL078595.1-201ENST00000404458 226 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 FAT1P1-201ENST00000406588 507 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 Y_RNA.615-201ENST00000410769 117 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms