Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SNRPGP6-201ENST00000451124 220 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.1□□□□□ -1.91
SNED1Q8TER0 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.1□□□□□ -1.91
SNED1Q8TER0 snoU13.4-201ENST00000458916 104 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 AC234781.5-201ENST00000508429 271 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 AC004062.1-201ENST00000509926 645 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.1□□□□□ -1.91
SNED1Q8TER0 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
SNED1Q8TER0 RNU6-1281P-201ENST00000516223 105 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 Y_RNA.701-201ENST00000516812 110 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 AP003034.1-201ENST00000534621 422 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 AC125611.2-201ENST00000551907 647 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 HIF1AP1-201ENST00000553642 175 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 SNORD84-203ENST00000584275 78 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 AC078899.3-201ENST00000599065 212 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 FRG1KP-201ENST00000623592 341 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.1□□□□□ -1.91
SNED1Q8TER0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
SNED1Q8TER0 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.1□□□□□ -1.91
SNED1Q8TER0 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SNED1Q8TER0 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SNED1Q8TER0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SNED1Q8TER0 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.1□□□□□ -1.91
SNED1Q8TER0 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SNED1Q8TER0 RNA5SP258-201ENST00000362750 119 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 Y_RNA.142-201ENST00000363491 102 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.1□□□□□ -1.91
SNED1Q8TER0 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.1□□□□□ -1.91
SNED1Q8TER0 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 AL445669.1-201ENST00000426743 755 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.1□□□□□ -1.91
SNED1Q8TER0 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.1□□□□□ -1.91
SNED1Q8TER0 RPL31P35-201ENST00000431058 377 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.1□□□□□ -1.91
SNED1Q8TER0 IFNA11P-201ENST00000446352 526 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.1□□□□□ -1.91
SNED1Q8TER0 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.1□□□□□ -1.91
SNED1Q8TER0 RNU7-136P-201ENST00000458819 69 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SNED1Q8TER0 AC023194.1-201ENST00000493084 308 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.1□□□□□ -1.91
SNED1Q8TER0 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.1□□□□□ -1.91
SNED1Q8TER0 Y_RNA.672-201ENST00000516289 104 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 RNA5SP380-201ENST00000517190 98 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 AC100870.1-201ENST00000522035 505 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.1□□□□□ -1.91
SNED1Q8TER0 ARL2BPP2-201ENST00000550907 489 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.1□□□□□ -1.91
SNED1Q8TER0 RPS3AP23-202ENST00000574601 686 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 AC009163.5-201ENST00000575421 637 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.1□□□□□ -1.91
SNED1Q8TER0 AL162413.1-201ENST00000603198 110 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 AL391646.1-201ENST00000603860 190 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 AC025588.3-201ENST00000604182 274 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 BCRP9-201ENST00000605312 388 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 MIR98-201ENST00000606724 119 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 RNU6-87P-201ENST00000607561 108 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.1□□□□□ -1.91
SNED1Q8TER0 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.1□□□□□ -1.91
SNED1Q8TER0 AC092881.1-201ENST00000638218 2733 ntBASIC3.09□□□□□ -1.91
SNED1Q8TER0 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.09□□□□□ -1.91
SNED1Q8TER0 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SNED1Q8TER0 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SNED1Q8TER0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SNED1Q8TER0 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
SNED1Q8TER0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SNED1Q8TER0 RNU6-1249P-201ENST00000363237 111 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 Y_RNA.279-201ENST00000364763 95 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 RNU6-921P-201ENST00000384361 107 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
SNED1Q8TER0 RNU6-821P-201ENST00000390995 107 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 RPS20P2-201ENST00000402520 389 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 MRPL42P2-201ENST00000403169 426 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SNED1Q8TER0 FAT1P1-201ENST00000406588 507 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 AC127391.1-201ENST00000411737 98 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 AL133384.1-201ENST00000412744 351 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.09□□□□□ -1.92
SNED1Q8TER0 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.09□□□□□ -1.92
SNED1Q8TER0 MTCO1P39-201ENST00000426148 480 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 HMGN2P3-201ENST00000433603 273 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 HMGN2P5-201ENST00000436882 273 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 RPL7P54-201ENST00000438336 674 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 RPS12P2-201ENST00000439728 269 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 AC011816.1-201ENST00000441346 546 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.09□□□□□ -1.92
SNED1Q8TER0 MTND1P12-201ENST00000455231 147 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 TRBV26-201ENST00000456572 344 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 HMGN1P10-201ENST00000474557 553 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 AC012181.1-201ENST00000479895 423 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.09□□□□□ -1.92
SNED1Q8TER0 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.09□□□□□ -1.92
SNED1Q8TER0 RNU6-445P-201ENST00000516949 107 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 RNU6-1003P-201ENST00000517099 105 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 ATP5F1P5-201ENST00000526403 760 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 AP003181.2-201ENST00000528941 181 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.09□□□□□ -1.92
SNED1Q8TER0 AL442663.2-201ENST00000554385 511 ntBASIC3.09□□□□□ -1.92
SNED1Q8TER0 MIR1273D-201ENST00000577266 86 ntBASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms