Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MIR1265-201ENST00000408444 86 ntBASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 EDDM3CP-201ENST00000415977 425 ntBASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 RPS20P20-201ENST00000460498 340 ntBASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 SFR1P2-201ENST00000421841 730 ntBASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 AC021146.2-201ENST00000504736 556 ntBASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 RNU6-319P-201ENST00000516025 108 ntBASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 SNRPGP16-201ENST00000533275 226 ntBASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 AP000254.1-201ENST00000609934 520 ntBASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 DUXAP10-204ENST00000612052 616 ntBASIC0.46□□□□□ -2.34
ALMS1Q8TCU4 RNU6-1235P-201ENST00000384559 107 ntBASIC0.45□□□□□ -2.34
ALMS1Q8TCU4 MIR329-1-201ENST00000385028 80 ntBASIC0.45□□□□□ -2.34
ALMS1Q8TCU4 AL354941.1-201ENST00000438600 464 ntBASIC0.45□□□□□ -2.34
ALMS1Q8TCU4 RNU6-498P-201ENST00000459468 107 ntBASIC0.45□□□□□ -2.34
ALMS1Q8TCU4 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.45□□□□□ -2.34
ALMS1Q8TCU4 MIR4636-201ENST00000582271 80 ntBASIC0.45□□□□□ -2.34
ALMS1Q8TCU4 AC106900.2-201ENST00000604994 317 ntBASIC0.45□□□□□ -2.34
ALMS1Q8TCU4 BX322635.1-201ENST00000605804 496 ntBASIC0.45□□□□□ -2.34
ALMS1Q8TCU4 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.45□□□□□ -2.34
ALMS1Q8TCU4 MIR493-201ENST00000385254 89 ntBASIC0.45□□□□□ -2.34
ALMS1Q8TCU4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.45□□□□□ -2.34
ALMS1Q8TCU4 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.45□□□□□ -2.34
ALMS1Q8TCU4 AC083865.1-201ENST00000636634 831 ntBASIC0.45□□□□□ -2.34
ALMS1Q8TCU4 RNU6-418P-201ENST00000384035 107 ntBASIC0.45□□□□□ -2.34
ALMS1Q8TCU4 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.45□□□□□ -2.34
ALMS1Q8TCU4 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC0.45□□□□□ -2.34
ALMS1Q8TCU4 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.45□□□□□ -2.34
ALMS1Q8TCU4 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC0.45□□□□□ -2.34
ALMS1Q8TCU4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.45□□□□□ -2.34
ALMS1Q8TCU4 MIR4661-201ENST00000582720 75 ntBASIC0.45□□□□□ -2.34
ALMS1Q8TCU4 AP002791.1-201ENST00000623291 381 ntBASIC0.45□□□□□ -2.34
ALMS1Q8TCU4 RNU5D-1-201ENST00000363299 116 ntBASIC0.44□□□□□ -2.34
ALMS1Q8TCU4 Y_RNA.488-201ENST00000384403 102 ntBASIC0.44□□□□□ -2.34
ALMS1Q8TCU4 Y_RNA.610-201ENST00000410681 103 ntBASIC0.44□□□□□ -2.34
ALMS1Q8TCU4 AC093106.2-201ENST00000428212 385 ntBASIC0.44□□□□□ -2.34
ALMS1Q8TCU4 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.44□□□□□ -2.34
ALMS1Q8TCU4 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.44□□□□□ -2.34
ALMS1Q8TCU4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.44□□□□□ -2.34
ALMS1Q8TCU4 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.44□□□□□ -2.34
ALMS1Q8TCU4 AC005786.1-201ENST00000588553 154 ntBASIC0.44□□□□□ -2.34
ALMS1Q8TCU4 AC073111.2-201ENST00000605657 1075 ntBASIC0.44□□□□□ -2.34
ALMS1Q8TCU4 AL391834.1-201ENST00000609609 560 ntBASIC0.44□□□□□ -2.34
ALMS1Q8TCU4 RNA5SP240-201ENST00000365355 128 ntBASIC0.44□□□□□ -2.34
ALMS1Q8TCU4 MIR146A-201ENST00000385201 99 ntBASIC0.44□□□□□ -2.34
ALMS1Q8TCU4 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.44□□□□□ -2.34
ALMS1Q8TCU4 snoU13.28-201ENST00000459235 104 ntBASIC0.44□□□□□ -2.34
ALMS1Q8TCU4 AC084373.1-201ENST00000603311 235 ntBASIC0.44□□□□□ -2.34
ALMS1Q8TCU4 AL356585.4-201ENST00000623078 1229 ntBASIC0.44□□□□□ -2.34
ALMS1Q8TCU4 RNA5SP347-201ENST00000362445 119 ntBASIC0.44□□□□□ -2.34
ALMS1Q8TCU4 RNU6-288P-201ENST00000363690 104 ntBASIC0.44□□□□□ -2.34
ALMS1Q8TCU4 KLF3P2-201ENST00000465138 268 ntBASIC0.44□□□□□ -2.34
ALMS1Q8TCU4 AL360181.4-201ENST00000621752 134 ntBASIC0.44□□□□□ -2.34
ALMS1Q8TCU4 uc_338.22-201ENST00000622722 187 ntBASIC0.44□□□□□ -2.34
ALMS1Q8TCU4 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC0.44□□□□□ -2.34
ALMS1Q8TCU4 MIR6866-201ENST00000638146 69 ntBASIC0.44□□□□□ -2.34
ALMS1Q8TCU4 OR4G2P-201ENST00000328113 903 ntBASIC0.43□□□□□ -2.34
ALMS1Q8TCU4 PRPS1P1-201ENST00000445305 876 ntBASIC0.43□□□□□ -2.34
ALMS1Q8TCU4 RNU6-758P-201ENST00000516292 89 ntBASIC0.43□□□□□ -2.34
ALMS1Q8TCU4 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC0.43□□□□□ -2.34
ALMS1Q8TCU4 AC004812.1-201ENST00000540773 146 ntBASIC0.43□□□□□ -2.34
ALMS1Q8TCU4 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.43□□□□□ -2.34
ALMS1Q8TCU4 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.43□□□□□ -2.34
ALMS1Q8TCU4 MIR3609-201ENST00000582661 80 ntBASIC0.43□□□□□ -2.34
ALMS1Q8TCU4 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
ALMS1Q8TCU4 RNU6-220P-201ENST00000390919 107 ntBASIC0.43□□□□□ -2.34
ALMS1Q8TCU4 MRPS36P2-201ENST00000512569 299 ntBASIC0.43□□□□□ -2.34
ALMS1Q8TCU4 RNU6-229P-201ENST00000516614 102 ntBASIC0.43□□□□□ -2.34
ALMS1Q8TCU4 NIFKP6-201ENST00000598115 845 ntBASIC0.43□□□□□ -2.34
ALMS1Q8TCU4 BNIP3P26-201ENST00000600827 554 ntBASIC0.43□□□□□ -2.34
ALMS1Q8TCU4 AL355877.2-201ENST00000603670 358 ntBASIC0.43□□□□□ -2.34
ALMS1Q8TCU4 AC016716.1-201ENST00000265882 708 ntBASIC0.43□□□□□ -2.34
ALMS1Q8TCU4 MIR1912-201ENST00000410389 80 ntBASIC0.43□□□□□ -2.34
ALMS1Q8TCU4 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.43□□□□□ -2.34
ALMS1Q8TCU4 UBL5P1-201ENST00000507979 193 ntBASIC0.43□□□□□ -2.34
ALMS1Q8TCU4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.43□□□□□ -2.34
ALMS1Q8TCU4 MTND5P11-201ENST00000511037 1812 ntBASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 Y_RNA.170-201ENST00000363746 110 ntBASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 OR9R1P-201ENST00000412200 877 ntBASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 AL591043.1-201ENST00000432461 424 ntBASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 AP000654.2-201ENST00000605633 586 ntBASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 AC073544.1-201ENST00000600110 1595 ntBASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 Y_RNA.67-201ENST00000362870 100 ntBASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 RPL31P60-201ENST00000478450 367 ntBASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms