Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.19□□□□□ -2.06
COL22A1Q8NFW1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
COL22A1Q8NFW1 SNORA38-201ENST00000363946 132 ntBASIC2.19□□□□□ -2.06
COL22A1Q8NFW1 RNU6-278P-201ENST00000390945 109 ntBASIC2.19□□□□□ -2.06
COL22A1Q8NFW1 RPL23AP29-201ENST00000397284 453 ntBASIC2.19□□□□□ -2.06
COL22A1Q8NFW1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
COL22A1Q8NFW1 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.19□□□□□ -2.06
COL22A1Q8NFW1 GTF2IP20-201ENST00000431663 360 ntBASIC2.19□□□□□ -2.06
COL22A1Q8NFW1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.19□□□□□ -2.06
COL22A1Q8NFW1 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.19□□□□□ -2.06
COL22A1Q8NFW1 ZNF886P-201ENST00000450781 723 ntBASIC2.19□□□□□ -2.06
COL22A1Q8NFW1 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.19□□□□□ -2.06
COL22A1Q8NFW1 snoU109.3-201ENST00000459477 145 ntBASIC2.19□□□□□ -2.06
COL22A1Q8NFW1 RPS29P20-201ENST00000489592 171 ntBASIC2.19□□□□□ -2.06
COL22A1Q8NFW1 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
COL22A1Q8NFW1 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.19□□□□□ -2.06
COL22A1Q8NFW1 AC093281.2-201ENST00000510153 597 ntBASIC2.19□□□□□ -2.06
COL22A1Q8NFW1 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.19□□□□□ -2.06
COL22A1Q8NFW1 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.19□□□□□ -2.06
COL22A1Q8NFW1 AC008015.1-201ENST00000555505 465 ntBASIC2.19□□□□□ -2.06
COL22A1Q8NFW1 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.19□□□□□ -2.06
COL22A1Q8NFW1 TUG1_2.1-201ENST00000614234 87 ntBASIC2.19□□□□□ -2.06
COL22A1Q8NFW1 AC005296.1-201ENST00000616145 209 ntBASIC2.19□□□□□ -2.06
COL22A1Q8NFW1 AP000720.1-201ENST00000625091 483 ntBASIC2.19□□□□□ -2.06
COL22A1Q8NFW1 MIR96-201ENST00000362288 78 ntBASIC2.18□□□□□ -2.06
COL22A1Q8NFW1 RNU6-853P-201ENST00000364306 107 ntBASIC2.18□□□□□ -2.06
COL22A1Q8NFW1 SNORA16.1-201ENST00000364597 132 ntBASIC2.18□□□□□ -2.06
COL22A1Q8NFW1 AC083875.1-201ENST00000419509 405 ntBASIC2.18□□□□□ -2.06
COL22A1Q8NFW1 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
COL22A1Q8NFW1 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.18□□□□□ -2.06
COL22A1Q8NFW1 ATP5J2P3-201ENST00000451550 258 ntBASIC2.18□□□□□ -2.06
COL22A1Q8NFW1 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.18□□□□□ -2.06
COL22A1Q8NFW1 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.18□□□□□ -2.06
COL22A1Q8NFW1 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.18□□□□□ -2.06
COL22A1Q8NFW1 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.18□□□□□ -2.06
COL22A1Q8NFW1 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.18□□□□□ -2.06
COL22A1Q8NFW1 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.18□□□□□ -2.06
COL22A1Q8NFW1 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.18□□□□□ -2.06
COL22A1Q8NFW1 PSMA3P-201ENST00000555485 635 ntBASIC2.18□□□□□ -2.06
COL22A1Q8NFW1 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.18□□□□□ -2.06
COL22A1Q8NFW1 AC060771.1-201ENST00000582031 164 ntBASIC2.18□□□□□ -2.06
COL22A1Q8NFW1 AC090186.1-201ENST00000605991 572 ntBASIC2.18□□□□□ -2.06
COL22A1Q8NFW1 AC239868.4-201ENST00000608318 671 ntBASIC2.18□□□□□ -2.06
COL22A1Q8NFW1 AL121652.1-201ENST00000608851 448 ntBASIC2.18□□□□□ -2.06
COL22A1Q8NFW1 AC245297.2-201ENST00000610119 565 ntBASIC2.18□□□□□ -2.06
COL22A1Q8NFW1 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
COL22A1Q8NFW1 SNHG22-203ENST00000617833 660 ntBASIC2.18□□□□□ -2.06
COL22A1Q8NFW1 PCMTD1P7-201ENST00000634506 357 ntBASIC2.18□□□□□ -2.06
COL22A1Q8NFW1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
COL22A1Q8NFW1 OR4G1P-203ENST00000641984 1631 ntBASIC2.18□□□□□ -2.06
COL22A1Q8NFW1 Y_RNA.245-201ENST00000364493 95 ntBASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 SNORA68.1-201ENST00000364537 132 ntBASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 SNORD114-22-201ENST00000365423 72 ntBASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 MIR888-201ENST00000401186 77 ntBASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 MTCO1P17-201ENST00000411522 491 ntBASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 MTATP6P20-201ENST00000414147 562 ntBASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 HMGB1P49-201ENST00000418882 569 ntBASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 SUMO1P4-201ENST00000429430 302 ntBASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 AC005410.1-202ENST00000460347 485 ntBASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 AC022447.3-201ENST00000506865 495 ntBASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 AC110760.3-202ENST00000515177 371 ntBASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 NACAP3-201ENST00000552100 481 ntBASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 MIR4419B-201ENST00000577260 68 ntBASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 SNORD53B-201ENST00000577887 78 ntBASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 AP002371.2-201ENST00000624450 503 ntBASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 MIR3199-2-201ENST00000636243 86 ntBASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 RNU1-42P-201ENST00000364033 160 ntBASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 RNU2-33P-201ENST00000410344 192 ntBASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 AC023141.4-201ENST00000412031 328 ntBASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 RPS3AP37-201ENST00000419176 745 ntBASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 AL451054.2-201ENST00000420896 202 ntBASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 USP12PX-201ENST00000432383 1057 ntBASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 RPS15AP5-201ENST00000436276 388 ntBASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 AC034222.1-201ENST00000494052 532 ntBASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 AC022634.1-201ENST00000520765 532 ntBASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 MIR5194-201ENST00000582634 120 ntBASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 AF129408.1-201ENST00000608767 431 ntBASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
COL22A1Q8NFW1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms