Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC197Q8NCU1 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC197Q8NCU1 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC197Q8NCU1 AL355877.2-201ENST00000603670 358 ntBASIC2.52□□□□□ -2.01
CCDC197Q8NCU1 AL139286.2-201ENST00000606838 396 ntBASIC2.52□□□□□ -2.01
CCDC197Q8NCU1 AC006566.1-201ENST00000608943 513 ntBASIC2.52□□□□□ -2.01
CCDC197Q8NCU1 AC011939.3-201ENST00000613686 466 ntBASIC2.52□□□□□ -2.01
CCDC197Q8NCU1 AC099842.1-201ENST00000619919 596 ntBASIC2.52□□□□□ -2.01
CCDC197Q8NCU1 AC093648.1-201ENST00000623546 606 ntBASIC2.52□□□□□ -2.01
CCDC197Q8NCU1 AC090582.1-201ENST00000636321 199 ntBASIC2.52□□□□□ -2.01
CCDC197Q8NCU1 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CCDC197Q8NCU1 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CCDC197Q8NCU1 AC000403.1-201ENST00000613696 3585 ntBASIC2.52□□□□□ -2.01
CCDC197Q8NCU1 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 RNU6-282P-201ENST00000365357 103 ntBASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 Z98749.2-208ENST00000381646 500 ntBASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 SNORA75B-201ENST00000384053 137 ntBASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 SNORA9-201ENST00000384215 133 ntBASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 U3.19-201ENST00000390893 196 ntBASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 RN7SKP202-201ENST00000410439 330 ntBASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 USP9YP27-201ENST00000418455 438 ntBASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 PIGFP2-201ENST00000421400 651 ntBASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 MTCO2P34-201ENST00000421994 607 ntBASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 GPR143P-201ENST00000434155 205 ntBASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 AL133547.1-201ENST00000448546 220 ntBASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 AC126389.1-201ENST00000477436 290 ntBASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 RPS15AP34-201ENST00000487776 387 ntBASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 AC093534.1-201ENST00000504977 132 ntBASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 RNU6-1183P-201ENST00000517054 60 ntBASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 RNU6-430P-201ENST00000517078 107 ntBASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 RN7SKP57-201ENST00000517248 293 ntBASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 AC025755.1-201ENST00000521306 278 ntBASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 AC006362.1-201ENST00000567392 174 ntBASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 AC012213.3-201ENST00000577199 777 ntBASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 MIR1273C-201ENST00000578669 77 ntBASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 AL451007.1-201ENST00000595491 289 ntBASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 AL022154.1-201ENST00000604698 785 ntBASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC197Q8NCU1 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 RNU6-74P-201ENST00000384235 107 ntBASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 CDK8P2-201ENST00000415020 547 ntBASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 OR51A5P-201ENST00000415429 942 ntBASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 AL031779.1-201ENST00000415663 330 ntBASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 AC096649.2-201ENST00000416186 393 ntBASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 AC004975.1-201ENST00000428733 208 ntBASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 AC133104.1-201ENST00000429100 218 ntBASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 AC079781.2-201ENST00000446424 169 ntBASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 AL513328.1-201ENST00000446460 224 ntBASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 AC128713.1-201ENST00000471495 306 ntBASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 AC116562.3-201ENST00000506136 177 ntBASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 AC079140.3-201ENST00000511111 550 ntBASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 RNU6-572P-201ENST00000516724 80 ntBASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 MTCO2P4-201ENST00000517968 247 ntBASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 MTCYBP20-201ENST00000524239 1129 ntBASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 AC068587.5-201ENST00000528506 175 ntBASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 AC021739.1-201ENST00000559631 174 ntBASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 CYCSP39-201ENST00000565821 309 ntBASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 AC136624.4-201ENST00000573044 370 ntBASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 RN7SKP299-201ENST00000606679 301 ntBASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 CR392039.5-201ENST00000623201 510 ntBASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 AC025034.2-201ENST00000623264 286 ntBASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 AL157786.1-207ENST00000627771 695 ntBASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 AC135776.4-201ENST00000624300 1904 ntBASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
CCDC197Q8NCU1 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 AC010889.1-201ENST00000566193 2666 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 RNU6-1097P-201ENST00000363586 107 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 RNU1-51P-201ENST00000365345 176 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 MIR144-201ENST00000384886 86 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 SNORA40C-201ENST00000391285 128 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 AL138827.1-201ENST00000402666 306 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 RNU6-1025P-201ENST00000410629 104 ntBASIC2.49□□□□□ -2.01
CCDC197Q8NCU1 RAB28P1-201ENST00000411517 641 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms