Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 RNU6-512P-201ENST00000364438 103 ntBASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 SNORA3.2-201ENST00000408221 125 ntBASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 HMGB3P2-201ENST00000411913 584 ntBASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 RPL17P12-201ENST00000413391 526 ntBASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 OSTCP8-201ENST00000445117 448 ntBASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 AL353705.4-201ENST00000449661 238 ntBASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 AL021397.1-201ENST00000451806 248 ntBASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 AC025033.1-201ENST00000463883 194 ntBASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 AC008549.1-201ENST00000512900 643 ntBASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 RNU1-40P-201ENST00000516816 164 ntBASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 RNU1-97P-201ENST00000516872 164 ntBASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 RNU6-703P-201ENST00000516946 107 ntBASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 MTATP6P15-201ENST00000527233 835 ntBASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 AC123904.2-201ENST00000548059 300 ntBASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 AC008751.2-201ENST00000597885 980 ntBASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 AP000811.1-201ENST00000603803 651 ntBASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 AC112187.2-201ENST00000604345 283 ntBASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 TUSC7.1-201ENST00000610969 165 ntBASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 AC079416.3-201ENST00000624479 549 ntBASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 UBE2L2-201ENST00000254302 429 ntBASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 RNU6-1214P-201ENST00000363650 109 ntBASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 SNORA16B-201ENST00000364674 135 ntBASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 NDUFS5P1-201ENST00000405668 289 ntBASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 RN7SKP32-201ENST00000410167 303 ntBASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 RN7SKP223-201ENST00000410582 62 ntBASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 NDUFS5P4-201ENST00000412983 318 ntBASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 AL139413.1-201ENST00000421309 217 ntBASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 DPH3P2-201ENST00000422618 250 ntBASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 AC096638.1-201ENST00000444678 216 ntBASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 SNORA59A-201ENST00000459326 152 ntBASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 MTND2P14-201ENST00000482139 351 ntBASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 RPL23AP41-201ENST00000484754 458 ntBASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 AC139453.3-201ENST00000493276 369 ntBASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 AC118465.1-201ENST00000513820 1271 ntBASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 SCARNA11.3-201ENST00000517276 130 ntBASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 MIR3146-201ENST00000580367 79 ntBASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 AP001004.1-201ENST00000582468 324 ntBASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 AC005261.5-201ENST00000596280 355 ntBASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 AC008749.1-201ENST00000597650 306 ntBASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 AL358072.1-201ENST00000604156 575 ntBASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 AP001486.3-201ENST00000615334 372 ntBASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.29□□□□□ -2.04
CCDC65Q8IXS2 RNU6-701P-201ENST00000384059 107 ntBASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 SNORA64-201ENST00000384674 134 ntBASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 AL139415.2-201ENST00000431968 163 ntBASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 AC108059.3-201ENST00000456388 214 ntBASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 TRBV1-201ENST00000476502 284 ntBASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 RPL9P6-201ENST00000492764 598 ntBASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 AC105252.1-201ENST00000503089 286 ntBASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 RNU5F-8P-201ENST00000515941 111 ntBASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 SNORA31.6-201ENST00000516241 130 ntBASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 RNU6-201P-201ENST00000517100 61 ntBASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 RPS3AP4-201ENST00000555161 764 ntBASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 KC877982.1-201ENST00000602313 470 ntBASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 AC009314.1-201ENST00000603871 304 ntBASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 AC103710.1-201ENST00000610003 901 ntBASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 DUSP12P1-201ENST00000612874 516 ntBASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 SDR42E1P4-201ENST00000620894 481 ntBASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 AL356266.1-201ENST00000623311 483 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms