Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 SNORD27.1-201ENST00000516319 72 ntBASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 AC011602.1-201ENST00000546484 331 ntBASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 AC002545.1-201ENST00000592511 181 ntBASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 AL162413.1-201ENST00000603198 110 ntBASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 AP000907.4-201ENST00000604143 237 ntBASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 AC106900.2-201ENST00000604994 317 ntBASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 AC092608.2-201ENST00000624427 218 ntBASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 MTND5P17-201ENST00000418405 1603 ntBASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 SMIM11P1-201ENST00000369586 178 ntBASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 RNU6-877P-201ENST00000383868 107 ntBASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 RNU6-1158P-201ENST00000391167 107 ntBASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 EI24P2-201ENST00000397776 1076 ntBASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 RPL32P35-201ENST00000415214 394 ntBASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 AC009963.1-201ENST00000417265 157 ntBASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 RPL27AP8-201ENST00000424277 446 ntBASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 HMGB3P8-201ENST00000449709 577 ntBASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 RNU6-420P-201ENST00000458780 107 ntBASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 snoU13.26-201ENST00000459452 105 ntBASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 MRPS17P3-201ENST00000465453 385 ntBASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 RPL23AP14-201ENST00000468281 468 ntBASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 AC083798.1-201ENST00000472671 131 ntBASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 RNA5SP468-201ENST00000516782 93 ntBASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 RN7SKP258-201ENST00000517151 304 ntBASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 AP001804.3-201ENST00000525146 880 ntBASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 RPS3AP4-201ENST00000555161 764 ntBASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 AC027176.1-201ENST00000560204 514 ntBASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 MIR3186-201ENST00000577404 85 ntBASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 AC092628.2-201ENST00000622492 339 ntBASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 AC025034.2-201ENST00000623264 286 ntBASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
KRT28Q7Z3Y7 ASNSP3-201ENST00000451989 1306 ntBASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 Y_RNA.295-201ENST00000364918 102 ntBASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 SNORA24.1-201ENST00000384401 135 ntBASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 AC003685.2-201ENST00000422795 395 ntBASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 MTND1P2-201ENST00000430604 821 ntBASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 HMGB1P18-201ENST00000438801 619 ntBASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 NFU1P2-201ENST00000448700 469 ntBASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 AL356010.1-201ENST00000456364 102 ntBASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 RPS29P15-201ENST00000458329 171 ntBASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 RNU6-261P-201ENST00000459506 102 ntBASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 RPL31P60-201ENST00000478450 367 ntBASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 MTAPP1-201ENST00000489154 819 ntBASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 AC108078.2-201ENST00000510750 236 ntBASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 AC104027.1-201ENST00000521887 300 ntBASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 AP006587.4-201ENST00000526053 529 ntBASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 AP002770.2-201ENST00000543613 532 ntBASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 AC008752.3-201ENST00000588113 712 ntBASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 AC104458.1-201ENST00000608243 463 ntBASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 AL137003.2-201ENST00000606924 2538 ntBASIC3.8□□□□□ -1.8
KRT28Q7Z3Y7 AC093536.2-201ENST00000565257 1406 ntBASIC3.79□□□□□ -1.8
KRT28Q7Z3Y7 RNU6-996P-201ENST00000365438 107 ntBASIC3.79□□□□□ -1.8
KRT28Q7Z3Y7 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.79□□□□□ -1.8
KRT28Q7Z3Y7 DEFB109C-201ENST00000382575 264 ntBASIC3.79□□□□□ -1.8
KRT28Q7Z3Y7 DEFB109B-201ENST00000382656 264 ntBASIC3.79□□□□□ -1.8
KRT28Q7Z3Y7 SNORA69-201ENST00000383895 132 ntBASIC3.79□□□□□ -1.8
KRT28Q7Z3Y7 MIR504-201ENST00000385065 83 ntBASIC3.79□□□□□ -1.8
KRT28Q7Z3Y7 AL356057.3-201ENST00000402607 340 ntBASIC3.79□□□□□ -1.8
KRT28Q7Z3Y7 RN7SKP285-201ENST00000410137 318 ntBASIC3.79□□□□□ -1.8
KRT28Q7Z3Y7 AL513331.1-201ENST00000411908 397 ntBASIC3.79□□□□□ -1.8
KRT28Q7Z3Y7 RPL30P2-201ENST00000414021 291 ntBASIC3.79□□□□□ -1.8
KRT28Q7Z3Y7 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.79□□□□□ -1.8
KRT28Q7Z3Y7 AL451054.2-201ENST00000420896 202 ntBASIC3.79□□□□□ -1.8
KRT28Q7Z3Y7 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms