Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.23□□□□□ -1.89
COLCA1Q6ZS62 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
COLCA1Q6ZS62 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.23□□□□□ -1.89
COLCA1Q6ZS62 AC009812.4-201ENST00000569134 1805 ntBASIC3.23□□□□□ -1.89
COLCA1Q6ZS62 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
COLCA1Q6ZS62 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 RNU6-288P-201ENST00000363690 104 ntBASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 Y_RNA.202-201ENST00000364083 110 ntBASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 RN7SKP280-201ENST00000364196 304 ntBASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 RNU6-190P-201ENST00000384154 102 ntBASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 RNU6-310P-201ENST00000384655 107 ntBASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 RPL23AP14-201ENST00000468281 468 ntBASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 AC079140.5-201ENST00000507882 310 ntBASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 MTCYBP40-201ENST00000509390 1135 ntBASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 RNA5SP468-201ENST00000516782 93 ntBASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 AL121603.1-201ENST00000553815 142 ntBASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 DNAJC8P1-201ENST00000554535 372 ntBASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 AC006504.6-201ENST00000590142 199 ntBASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 AC016925.2-201ENST00000605108 242 ntBASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 AC019193.3-201ENST00000609144 554 ntBASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 U2.17-201ENST00000611454 95 ntBASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 AC015967.1-201ENST00000619893 476 ntBASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
COLCA1Q6ZS62 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 AC002546.1-201ENST00000588041 2504 ntBASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 RNU6-371P-201ENST00000364283 108 ntBASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 RNU6-1303P-201ENST00000364841 107 ntBASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 Y_RNA.482-201ENST00000384377 111 ntBASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 Y_RNA.646-201ENST00000410980 101 ntBASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 RNA5SP111-201ENST00000411386 101 ntBASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 ATG3P1-201ENST00000419507 911 ntBASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 AL160275.3-201ENST00000423876 471 ntBASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 AL591704.1-201ENST00000432574 275 ntBASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 RPS29P7-201ENST00000439662 171 ntBASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 RPL21P23-201ENST00000446654 460 ntBASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 AC104472.2-201ENST00000469035 601 ntBASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 HMGN2P13-201ENST00000476476 274 ntBASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 RPL39P5-202ENST00000512505 151 ntBASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 RN7SKP83-201ENST00000516512 178 ntBASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 RNU6-1046P-201ENST00000516538 107 ntBASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 RNU6-1137P-201ENST00000517073 99 ntBASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 RANP9-201ENST00000519957 271 ntBASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 SNRPGP18-201ENST00000553000 214 ntBASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 AC106782.4-201ENST00000568264 210 ntBASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 MIR5685-201ENST00000579080 79 ntBASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 AC093227.2-201ENST00000589357 285 ntBASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 AL359547.2-201ENST00000615810 418 ntBASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 AC022418.1-201ENST00000624118 445 ntBASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
COLCA1Q6ZS62 MTND5P19-201ENST00000424872 1794 ntBASIC3.2□□□□□ -1.9
COLCA1Q6ZS62 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COLCA1Q6ZS62 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COLCA1Q6ZS62 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COLCA1Q6ZS62 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.2□□□□□ -1.9
COLCA1Q6ZS62 Y_RNA.5-201ENST00000362334 102 ntBASIC3.2□□□□□ -1.9
COLCA1Q6ZS62 Y_RNA.112-201ENST00000363250 102 ntBASIC3.2□□□□□ -1.9
COLCA1Q6ZS62 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COLCA1Q6ZS62 RNU6-434P-201ENST00000384376 107 ntBASIC3.2□□□□□ -1.9
COLCA1Q6ZS62 SNORD3H-201ENST00000384486 214 ntBASIC3.2□□□□□ -1.9
COLCA1Q6ZS62 RNU6-601P-201ENST00000384540 107 ntBASIC3.2□□□□□ -1.9
COLCA1Q6ZS62 SAR1AP2-201ENST00000392696 594 ntBASIC3.2□□□□□ -1.9
COLCA1Q6ZS62 RPS4XP7-201ENST00000406274 780 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms