Protein–RNA interactions for Protein: Q6WKZ4

RAB11FIP1, Rab11 family-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1Q6WKZ4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
RAB11FIP1Q6WKZ4 AL353746.1-201ENST00000566293 6881 ntBASIC3.71□□□□□ -1.81
RAB11FIP1Q6WKZ4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 DEFB108F-201ENST00000344638 222 ntBASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 RNU6-173P-201ENST00000364215 104 ntBASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 Y_RNA.482-201ENST00000384377 111 ntBASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 RNU6-45P-201ENST00000384471 107 ntBASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 RNU6-954P-201ENST00000411355 107 ntBASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 ATP5A1P2-201ENST00000412323 255 ntBASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 BX842559.1-201ENST00000419615 532 ntBASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 SNAP23P1-201ENST00000433229 246 ntBASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 BRK1P2-201ENST00000442875 223 ntBASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 RPL23AP14-201ENST00000468281 468 ntBASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 AC010285.1-201ENST00000470580 392 ntBASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 RPS27P27-201ENST00000498779 255 ntBASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 AC110768.1-201ENST00000509222 400 ntBASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 NDUFB4P9-201ENST00000511646 388 ntBASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 RPL39P5-202ENST00000512505 151 ntBASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 APOOP4-201ENST00000513530 597 ntBASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 AC008011.1-201ENST00000545989 227 ntBASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.71□□□□□ -1.82
RAB11FIP1Q6WKZ4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 MIR369-201ENST00000362155 70 ntBASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 RNU6-1188P-201ENST00000363795 107 ntBASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 Y_RNA.187-201ENST00000363918 113 ntBASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 SNORA4.3-201ENST00000365564 137 ntBASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 RNU6-128P-201ENST00000383976 107 ntBASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 MIR514A1-201ENST00000385133 98 ntBASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 MIR559-201ENST00000385188 96 ntBASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 RNU6-370P-201ENST00000411008 104 ntBASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 Z82205.1-201ENST00000428456 297 ntBASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 HMGB1P27-201ENST00000431429 603 ntBASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 AC073063.1-201ENST00000434352 607 ntBASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 RPS24P13-201ENST00000442520 397 ntBASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 ELOCP24-201ENST00000456370 334 ntBASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 Y_RNA.631-201ENST00000459607 101 ntBASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 RPL37P6-201ENST00000460682 294 ntBASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 RPL9P32-201ENST00000464118 620 ntBASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 AC092451.1-201ENST00000480211 153 ntBASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 RN7SL293P-201ENST00000481765 281 ntBASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 TRBV12-2-201ENST00000489763 344 ntBASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 TBCAP3-201ENST00000512475 312 ntBASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 AC012119.1-201ENST00000603184 222 ntBASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 MTND4P27-201ENST00000450813 1354 ntBASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 MTCO1P12-201ENST00000414273 1543 ntBASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RAB11FIP1Q6WKZ4 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RAB11FIP1Q6WKZ4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.69□□□□□ -1.82
RAB11FIP1Q6WKZ4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RAB11FIP1Q6WKZ4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
RAB11FIP1Q6WKZ4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RAB11FIP1Q6WKZ4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RAB11FIP1Q6WKZ4 RNU5A-1-201ENST00000362698 116 ntBASIC3.69□□□□□ -1.82
RAB11FIP1Q6WKZ4 Y_RNA.333-201ENST00000365274 102 ntBASIC3.69□□□□□ -1.82
RAB11FIP1Q6WKZ4 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.69□□□□□ -1.82
RAB11FIP1Q6WKZ4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RAB11FIP1Q6WKZ4 HMGN2P8-201ENST00000391458 268 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms