Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
RSPO4Q2I0M5 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RSPO4Q2I0M5 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
RSPO4Q2I0M5 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
RSPO4Q2I0M5 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RSPO4Q2I0M5 AC093671.1-201ENST00000624981 2929 ntBASIC4.55□□□□□ -1.68
RSPO4Q2I0M5 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
RSPO4Q2I0M5 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
RSPO4Q2I0M5 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
RSPO4Q2I0M5 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 AC008758.3-201ENST00000507003 1829 ntBASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 RNU6-899P-201ENST00000363947 107 ntBASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 RNA5SP513-201ENST00000364648 118 ntBASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 Y_RNA.570-201ENST00000384750 101 ntBASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 MIR491-201ENST00000384877 84 ntBASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 AL645608.4-201ENST00000423619 154 ntBASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 AL450023.3-201ENST00000440592 271 ntBASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 RANP8-201ENST00000444720 713 ntBASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 AC016700.2-201ENST00000446011 156 ntBASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 H2AFZP5-201ENST00000446960 382 ntBASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 AC073587.1-201ENST00000447093 876 ntBASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 RN7SL441P-201ENST00000492388 296 ntBASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 RMST_4.1-201ENST00000616886 107 ntBASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 MIR6875-201ENST00000617506 72 ntBASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 MIR6839-201ENST00000620425 113 ntBASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
RSPO4Q2I0M5 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 AP005435.3-201ENST00000531260 3198 ntBASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 AC100778.3-201ENST00000580060 1750 ntBASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 RNU6-222P-201ENST00000362438 107 ntBASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 Y_RNA.111-201ENST00000363248 100 ntBASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 RNU6-827P-201ENST00000365553 106 ntBASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 RPS4XP3-201ENST00000398541 413 ntBASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 RN7SKP284-201ENST00000411002 343 ntBASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 AC063979.1-201ENST00000415539 377 ntBASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 RPS12P23-201ENST00000419579 400 ntBASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 WARS2P1-201ENST00000429678 537 ntBASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 USP9YP7-201ENST00000436723 430 ntBASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 AC022431.1-201ENST00000450941 438 ntBASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 USP9YP32-201ENST00000452432 430 ntBASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 RNU1-86P-201ENST00000516108 154 ntBASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 RNU1-107P-201ENST00000516617 154 ntBASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 AC007179.3-201ENST00000604976 235 ntBASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 snoU18.1-201ENST00000629629 71 ntBASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 MIR3658-201ENST00000636291 56 ntBASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 TLK1P1-201ENST00000456760 2440 ntBASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 AL022311.1-201ENST00000623726 19416 ntBASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RSPO4Q2I0M5 AC073136.1-201ENST00000449426 2884 ntBASIC4.52□□□□□ -1.69
RSPO4Q2I0M5 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RSPO4Q2I0M5 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
RSPO4Q2I0M5 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RSPO4Q2I0M5 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
RSPO4Q2I0M5 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RSPO4Q2I0M5 MUC2-202ENST00000613187 4845 ntBASIC4.52□□□□□ -1.69
RSPO4Q2I0M5 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RSPO4Q2I0M5 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
RSPO4Q2I0M5 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RSPO4Q2I0M5 NCAPGP1-201ENST00000505112 1814 ntBASIC4.52□□□□□ -1.69
RSPO4Q2I0M5 RNU6-512P-201ENST00000364438 103 ntBASIC4.52□□□□□ -1.69
RSPO4Q2I0M5 RNU4-17P-201ENST00000365598 141 ntBASIC4.52□□□□□ -1.69
RSPO4Q2I0M5 RNU6-76P-201ENST00000384060 104 ntBASIC4.52□□□□□ -1.69
RSPO4Q2I0M5 RNU6-1179P-201ENST00000384667 107 ntBASIC4.52□□□□□ -1.69
RSPO4Q2I0M5 Z98745.1-201ENST00000402553 494 ntBASIC4.52□□□□□ -1.69
RSPO4Q2I0M5 RN7SKP16-201ENST00000410180 299 ntBASIC4.52□□□□□ -1.69
RSPO4Q2I0M5 AC093578.1-201ENST00000415219 368 ntBASIC4.52□□□□□ -1.69
RSPO4Q2I0M5 RPS15AP7-201ENST00000439294 405 ntBASIC4.52□□□□□ -1.69
RSPO4Q2I0M5 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.52□□□□□ -1.69
RSPO4Q2I0M5 AL691482.1-201ENST00000453255 87 ntBASIC4.52□□□□□ -1.69
RSPO4Q2I0M5 RNU7-107P-201ENST00000459121 61 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms