Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RNU6-778P-201ENST00000363269 103 ntBASIC3.56□□□□□ -1.84
NKX6-1P78426 RNU6-384P-201ENST00000364900 104 ntBASIC3.56□□□□□ -1.84
NKX6-1P78426 Y_RNA.387-201ENST00000383918 102 ntBASIC3.56□□□□□ -1.84
NKX6-1P78426 MIR483-201ENST00000385070 76 ntBASIC3.56□□□□□ -1.84
NKX6-1P78426 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
NKX6-1P78426 RNU6-1106P-201ENST00000390845 107 ntBASIC3.56□□□□□ -1.84
NKX6-1P78426 AL360182.1-201ENST00000397433 468 ntBASIC3.56□□□□□ -1.84
NKX6-1P78426 MIR548K-201ENST00000408406 116 ntBASIC3.56□□□□□ -1.84
NKX6-1P78426 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.56□□□□□ -1.84
NKX6-1P78426 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.56□□□□□ -1.84
NKX6-1P78426 AC099548.1-201ENST00000421443 426 ntBASIC3.56□□□□□ -1.84
NKX6-1P78426 UBE2V1P4-201ENST00000425374 344 ntBASIC3.56□□□□□ -1.84
NKX6-1P78426 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NKX6-1P78426 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.56□□□□□ -1.84
NKX6-1P78426 MRPS31P2-201ENST00000451581 518 ntBASIC3.56□□□□□ -1.84
NKX6-1P78426 HMGB3P22-202ENST00000451823 572 ntBASIC3.56□□□□□ -1.84
NKX6-1P78426 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NKX6-1P78426 Y_RNA.635-201ENST00000459041 101 ntBASIC3.56□□□□□ -1.84
NKX6-1P78426 AC026726.1-201ENST00000512859 601 ntBASIC3.56□□□□□ -1.84
NKX6-1P78426 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.56□□□□□ -1.84
NKX6-1P78426 COPS8P3-201ENST00000526024 482 ntBASIC3.56□□□□□ -1.84
NKX6-1P78426 AP000889.1-201ENST00000530968 660 ntBASIC3.56□□□□□ -1.84
NKX6-1P78426 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.56□□□□□ -1.84
NKX6-1P78426 LINC00933-203ENST00000559812 219 ntBASIC3.56□□□□□ -1.84
NKX6-1P78426 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.56□□□□□ -1.84
NKX6-1P78426 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.56□□□□□ -1.84
NKX6-1P78426 MIR7702-201ENST00000621931 59 ntBASIC3.56□□□□□ -1.84
NKX6-1P78426 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.56□□□□□ -1.84
NKX6-1P78426 U2.21-201ENST00000637295 81 ntBASIC3.56□□□□□ -1.84
NKX6-1P78426 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.56□□□□□ -1.84
NKX6-1P78426 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
NKX6-1P78426 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.56□□□□□ -1.84
NKX6-1P78426 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
NKX6-1P78426 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
NKX6-1P78426 AL161912.2-201ENST00000565707 3007 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 MAPK10-373ENST00000641983 6772 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.55□□□□□ -1.84
NKX6-1P78426 AL136164.4-201ENST00000625013 2135 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
NKX6-1P78426 AC138393.1-203ENST00000327086 343 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 Y_RNA.135-201ENST00000363439 95 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 Y_RNA.509-201ENST00000384506 99 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
NKX6-1P78426 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.55□□□□□ -1.84
NKX6-1P78426 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 MIR548F5-201ENST00000408421 86 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 RPL37P10-201ENST00000412884 288 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 AL096701.2-201ENST00000416920 238 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 AC236972.2-201ENST00000434979 310 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 AC006011.1-201ENST00000442758 349 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.55□□□□□ -1.84
NKX6-1P78426 AC092001.1-201ENST00000453012 261 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 RPL26P9-201ENST00000457466 433 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 snoU13.28-201ENST00000459235 104 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 AC084198.1-201ENST00000477747 402 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 RPS27P27-201ENST00000498779 255 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NKX6-1P78426 AC017037.1-201ENST00000508460 471 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 AC096745.1-201ENST00000509945 370 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.55□□□□□ -1.84
NKX6-1P78426 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.55□□□□□ -1.84
NKX6-1P78426 RN7SKP24-201ENST00000515888 284 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 RNU6-277P-201ENST00000516272 106 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 RNU6-1183P-201ENST00000517054 60 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.55□□□□□ -1.84
NKX6-1P78426 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
NKX6-1P78426 AP005639.2-201ENST00000527592 928 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.55□□□□□ -1.84
NKX6-1P78426 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.55□□□□□ -1.84
NKX6-1P78426 H3F3AP1-201ENST00000559984 334 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.55□□□□□ -1.84
NKX6-1P78426 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.55□□□□□ -1.84
NKX6-1P78426 MIR4644-201ENST00000579929 84 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.55□□□□□ -1.84
NKX6-1P78426 AP000787.2-201ENST00000604432 568 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 AC012468.1-201ENST00000604888 430 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 AC012603.1-201ENST00000606424 528 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.55□□□□□ -1.84
NKX6-1P78426 AC019176.2-201ENST00000611579 315 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 AC064801.1-201ENST00000612025 407 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 AC091953.5-201ENST00000622919 233 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 ZNF519P1-201ENST00000449011 1626 ntBASIC3.55□□□□□ -1.84
NKX6-1P78426 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NKX6-1P78426 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.55□□□□□ -1.84
NKX6-1P78426 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NKX6-1P78426 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
NKX6-1P78426 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NKX6-1P78426 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NKX6-1P78426 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
NKX6-1P78426 RNU4-79P-201ENST00000362764 141 ntBASIC3.54□□□□□ -1.84
NKX6-1P78426 RNU6-270P-201ENST00000364131 105 ntBASIC3.54□□□□□ -1.84
NKX6-1P78426 Y_RNA.474-201ENST00000384341 102 ntBASIC3.54□□□□□ -1.84
NKX6-1P78426 Y_RNA.535-201ENST00000384612 99 ntBASIC3.54□□□□□ -1.84
NKX6-1P78426 RNU4-6P-201ENST00000410804 122 ntBASIC3.54□□□□□ -1.84
NKX6-1P78426 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.54□□□□□ -1.84
NKX6-1P78426 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.54□□□□□ -1.84
NKX6-1P78426 RPS3AP12-201ENST00000443616 753 ntBASIC3.54□□□□□ -1.84
NKX6-1P78426 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.54□□□□□ -1.84
NKX6-1P78426 AC233279.1-201ENST00000455300 423 ntBASIC3.54□□□□□ -1.84
NKX6-1P78426 BTF3P15-201ENST00000455606 336 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 210.6 ms