Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 RNU6-703P-201ENST00000516946 107 ntBASIC2□□□□□ -2.09
VSX2P58304 RANP3-201ENST00000530970 276 ntBASIC2□□□□□ -2.09
VSX2P58304 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2□□□□□ -2.09
VSX2P58304 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2□□□□□ -2.09
VSX2P58304 AGGF1P5-201ENST00000567900 919 ntBASIC2□□□□□ -2.09
VSX2P58304 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2□□□□□ -2.09
VSX2P58304 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2□□□□□ -2.09
VSX2P58304 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2□□□□□ -2.09
VSX2P58304 AC107214.2-201ENST00000608204 634 ntBASIC2□□□□□ -2.09
VSX2P58304 AC091965.5-201ENST00000624785 342 ntBASIC2□□□□□ -2.09
VSX2P58304 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2□□□□□ -2.09
VSX2P58304 AC110994.2-201ENST00000635481 492 ntBASIC2□□□□□ -2.09
VSX2P58304 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VSX2P58304 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2□□□□□ -2.09
VSX2P58304 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2□□□□□ -2.09
VSX2P58304 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
VSX2P58304 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
VSX2P58304 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.99□□□□□ -2.09
VSX2P58304 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
VSX2P58304 Y_RNA.46-201ENST00000362695 102 ntBASIC1.99□□□□□ -2.09
VSX2P58304 SNORD113-6-201ENST00000363345 75 ntBASIC1.99□□□□□ -2.09
VSX2P58304 RNU6-188P-201ENST00000364207 107 ntBASIC1.99□□□□□ -2.09
VSX2P58304 MIR218-1-201ENST00000384999 110 ntBASIC1.99□□□□□ -2.09
VSX2P58304 RNU6-278P-201ENST00000390945 109 ntBASIC1.99□□□□□ -2.09
VSX2P58304 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VSX2P58304 RNA5SP338-201ENST00000410495 85 ntBASIC1.99□□□□□ -2.09
VSX2P58304 NDUFS5P4-201ENST00000412983 318 ntBASIC1.99□□□□□ -2.09
VSX2P58304 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
VSX2P58304 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.99□□□□□ -2.09
VSX2P58304 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.99□□□□□ -2.09
VSX2P58304 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.99□□□□□ -2.09
VSX2P58304 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.99□□□□□ -2.09
VSX2P58304 RPL36AP53-201ENST00000432891 316 ntBASIC1.99□□□□□ -2.09
VSX2P58304 Z80107.1-201ENST00000436830 412 ntBASIC1.99□□□□□ -2.09
VSX2P58304 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VSX2P58304 SDR42E1P3-201ENST00000438345 502 ntBASIC1.99□□□□□ -2.09
VSX2P58304 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.99□□□□□ -2.09
VSX2P58304 OSTCP8-201ENST00000445117 448 ntBASIC1.99□□□□□ -2.09
VSX2P58304 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.99□□□□□ -2.09
VSX2P58304 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.99□□□□□ -2.09
VSX2P58304 AC090515.1-201ENST00000465295 476 ntBASIC1.99□□□□□ -2.09
VSX2P58304 RPS27P21-201ENST00000486977 252 ntBASIC1.99□□□□□ -2.09
VSX2P58304 SNORA31.18-201ENST00000517043 134 ntBASIC1.99□□□□□ -2.09
VSX2P58304 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.99□□□□□ -2.09
VSX2P58304 AC123904.2-201ENST00000548059 300 ntBASIC1.99□□□□□ -2.09
VSX2P58304 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.99□□□□□ -2.09
VSX2P58304 AC023824.2-201ENST00000566185 400 ntBASIC1.99□□□□□ -2.09
VSX2P58304 AC024619.4-201ENST00000580924 316 ntBASIC1.99□□□□□ -2.09
VSX2P58304 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.99□□□□□ -2.09
VSX2P58304 MIR4999-201ENST00000585029 91 ntBASIC1.99□□□□□ -2.09
VSX2P58304 AC073544.2-201ENST00000601155 540 ntBASIC1.99□□□□□ -2.09
VSX2P58304 AL031281.1-201ENST00000604049 488 ntBASIC1.99□□□□□ -2.09
VSX2P58304 AC092953.2-201ENST00000608000 699 ntBASIC1.99□□□□□ -2.09
VSX2P58304 DUSP12P1-201ENST00000612874 516 ntBASIC1.99□□□□□ -2.09
VSX2P58304 AL031601.2-202ENST00000622650 282 ntBASIC1.99□□□□□ -2.09
VSX2P58304 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.99□□□□□ -2.09
VSX2P58304 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.99□□□□□ -2.09
VSX2P58304 SNORD114-1-201ENST00000362705 72 ntBASIC1.98□□□□□ -2.09
VSX2P58304 RNU6-288P-201ENST00000363690 104 ntBASIC1.98□□□□□ -2.09
VSX2P58304 RNU6-660P-201ENST00000364566 109 ntBASIC1.98□□□□□ -2.09
VSX2P58304 RPS20P2-201ENST00000402520 389 ntBASIC1.98□□□□□ -2.09
VSX2P58304 HMGB1P49-201ENST00000418882 569 ntBASIC1.98□□□□□ -2.09
VSX2P58304 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.98□□□□□ -2.09
VSX2P58304 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.98□□□□□ -2.09
VSX2P58304 AC013410.2-201ENST00000422627 201 ntBASIC1.98□□□□□ -2.09
VSX2P58304 AL353729.1-201ENST00000425044 720 ntBASIC1.98□□□□□ -2.09
VSX2P58304 AC093106.2-201ENST00000428212 385 ntBASIC1.98□□□□□ -2.09
VSX2P58304 SRIP2-201ENST00000428470 166 ntBASIC1.98□□□□□ -2.09
VSX2P58304 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.98□□□□□ -2.09
VSX2P58304 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.98□□□□□ -2.09
VSX2P58304 GDI2P2-201ENST00000445131 608 ntBASIC1.98□□□□□ -2.09
VSX2P58304 HMGN2P10-201ENST00000448085 265 ntBASIC1.98□□□□□ -2.09
VSX2P58304 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.98□□□□□ -2.09
VSX2P58304 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.98□□□□□ -2.09
VSX2P58304 RNU6-717P-201ENST00000459076 104 ntBASIC1.98□□□□□ -2.09
VSX2P58304 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.98□□□□□ -2.09
VSX2P58304 HSPE1P18-201ENST00000517602 280 ntBASIC1.98□□□□□ -2.09
VSX2P58304 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.98□□□□□ -2.09
VSX2P58304 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.98□□□□□ -2.09
VSX2P58304 AC023050.2-201ENST00000544968 387 ntBASIC1.98□□□□□ -2.09
VSX2P58304 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.98□□□□□ -2.09
VSX2P58304 AL356432.3-201ENST00000568952 465 ntBASIC1.98□□□□□ -2.09
VSX2P58304 AC007151.1-201ENST00000572774 483 ntBASIC1.98□□□□□ -2.09
VSX2P58304 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.98□□□□□ -2.09
VSX2P58304 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.98□□□□□ -2.09
VSX2P58304 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.98□□□□□ -2.09
VSX2P58304 AL391813.1-201ENST00000603098 260 ntBASIC1.98□□□□□ -2.09
VSX2P58304 AC007363.1-201ENST00000604736 620 ntBASIC1.98□□□□□ -2.09
VSX2P58304 AL356266.1-201ENST00000623311 483 ntBASIC1.98□□□□□ -2.09
VSX2P58304 MIR3199-2-201ENST00000636243 86 ntBASIC1.98□□□□□ -2.09
VSX2P58304 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.98□□□□□ -2.09
VSX2P58304 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.98□□□□□ -2.09
VSX2P58304 MTND4P27-201ENST00000450813 1354 ntBASIC1.98□□□□□ -2.09
VSX2P58304 MTND4P35-201ENST00000604257 1375 ntBASIC1.98□□□□□ -2.09
VSX2P58304 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
VSX2P58304 AP006437.1-201ENST00000641440 3685 ntBASIC1.97□□□□□ -2.09
VSX2P58304 AL391994.1-201ENST00000254724 282 ntBASIC1.97□□□□□ -2.09
VSX2P58304 NACAP2-201ENST00000318548 624 ntBASIC1.97□□□□□ -2.09
VSX2P58304 Y_RNA.97-201ENST00000363094 102 ntBASIC1.97□□□□□ -2.09
VSX2P58304 SNORA38-201ENST00000363946 132 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms