Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MIR147B-201ENST00000390185 80 ntBASIC1.31□□□□□ -2.2
NUP98P52948 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.31□□□□□ -2.2
NUP98P52948 AC092393.1-201ENST00000439625 742 ntBASIC1.31□□□□□ -2.2
NUP98P52948 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.31□□□□□ -2.2
NUP98P52948 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
NUP98P52948 AC011604.1-201ENST00000545978 196 ntBASIC1.31□□□□□ -2.2
NUP98P52948 PSMA3P-201ENST00000555485 635 ntBASIC1.31□□□□□ -2.2
NUP98P52948 MIR4765-201ENST00000585007 77 ntBASIC1.31□□□□□ -2.2
NUP98P52948 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.31□□□□□ -2.2
NUP98P52948 AP003400.5-201ENST00000624827 617 ntBASIC1.31□□□□□ -2.2
NUP98P52948 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
NUP98P52948 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
NUP98P52948 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
NUP98P52948 RNU6-796P-201ENST00000391086 107 ntBASIC1.31□□□□□ -2.2
NUP98P52948 HMGB1P17-201ENST00000403495 628 ntBASIC1.31□□□□□ -2.2
NUP98P52948 AL356432.1-201ENST00000405809 419 ntBASIC1.31□□□□□ -2.2
NUP98P52948 RNU2-28P-201ENST00000410457 189 ntBASIC1.31□□□□□ -2.2
NUP98P52948 AC007742.1-201ENST00000425789 329 ntBASIC1.31□□□□□ -2.2
NUP98P52948 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.31□□□□□ -2.2
NUP98P52948 ELOCP26-201ENST00000436067 329 ntBASIC1.31□□□□□ -2.2
NUP98P52948 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.31□□□□□ -2.2
NUP98P52948 AC118282.2-201ENST00000508739 374 ntBASIC1.31□□□□□ -2.2
NUP98P52948 AP004247.1-201ENST00000531556 1289 ntBASIC1.31□□□□□ -2.2
NUP98P52948 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.31□□□□□ -2.2
NUP98P52948 AC004908.2-201ENST00000609090 574 ntBASIC1.31□□□□□ -2.2
NUP98P52948 U4atac.1-201ENST00000618345 95 ntBASIC1.31□□□□□ -2.2
NUP98P52948 LINC02211-204ENST00000642024 1070 ntBASIC1.31□□□□□ -2.2
NUP98P52948 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.3□□□□□ -2.2
NUP98P52948 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.3□□□□□ -2.2
NUP98P52948 RNA5SP325-201ENST00000363756 130 ntBASIC1.3□□□□□ -2.2
NUP98P52948 SNORA40.19-201ENST00000390846 128 ntBASIC1.3□□□□□ -2.2
NUP98P52948 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.3□□□□□ -2.2
NUP98P52948 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.3□□□□□ -2.2
NUP98P52948 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.3□□□□□ -2.2
NUP98P52948 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.3□□□□□ -2.2
NUP98P52948 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC1.3□□□□□ -2.2
NUP98P52948 MTND1P18-201ENST00000448191 573 ntBASIC1.3□□□□□ -2.2
NUP98P52948 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.3□□□□□ -2.2
NUP98P52948 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.3□□□□□ -2.2
NUP98P52948 AC092991.1-201ENST00000477176 376 ntBASIC1.3□□□□□ -2.2
NUP98P52948 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.3□□□□□ -2.2
NUP98P52948 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.3□□□□□ -2.2
NUP98P52948 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.3□□□□□ -2.2
NUP98P52948 AC093510.2-201ENST00000562820 896 ntBASIC1.3□□□□□ -2.2
NUP98P52948 AC105245.1-201ENST00000581934 244 ntBASIC1.3□□□□□ -2.2
NUP98P52948 MIR4295-201ENST00000585286 85 ntBASIC1.3□□□□□ -2.2
NUP98P52948 AL078603.1-201ENST00000603824 313 ntBASIC1.3□□□□□ -2.2
NUP98P52948 SNORD114-21-201ENST00000606412 72 ntBASIC1.3□□□□□ -2.2
NUP98P52948 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.3□□□□□ -2.2
NUP98P52948 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.3□□□□□ -2.2
NUP98P52948 AC109454.4-201ENST00000623411 649 ntBASIC1.3□□□□□ -2.2
NUP98P52948 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.3□□□□□ -2.2
NUP98P52948 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
NUP98P52948 RNU6-1-201ENST00000383898 107 ntBASIC1.29□□□□□ -2.2
NUP98P52948 RNU6-42P-201ENST00000384165 107 ntBASIC1.29□□□□□ -2.2
NUP98P52948 RNU6-36P-201ENST00000384172 107 ntBASIC1.29□□□□□ -2.2
NUP98P52948 RNU6-4P-201ENST00000384205 107 ntBASIC1.29□□□□□ -2.2
NUP98P52948 RNU6-5P-201ENST00000384238 107 ntBASIC1.29□□□□□ -2.2
NUP98P52948 RNU6-3P-201ENST00000384314 107 ntBASIC1.29□□□□□ -2.2
NUP98P52948 RNU6-2-201ENST00000384627 107 ntBASIC1.29□□□□□ -2.2
NUP98P52948 RNU6-9-201ENST00000384776 107 ntBASIC1.29□□□□□ -2.2
NUP98P52948 RNU6-33P-201ENST00000384793 107 ntBASIC1.29□□□□□ -2.2
NUP98P52948 NANOGP2-201ENST00000435391 727 ntBASIC1.29□□□□□ -2.2
NUP98P52948 FABP5P14-201ENST00000437273 393 ntBASIC1.29□□□□□ -2.2
NUP98P52948 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.29□□□□□ -2.2
NUP98P52948 AL121769.1-201ENST00000469473 401 ntBASIC1.29□□□□□ -2.2
NUP98P52948 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.29□□□□□ -2.2
NUP98P52948 RNU6-6P-201ENST00000606623 107 ntBASIC1.29□□□□□ -2.2
NUP98P52948 AL158211.4-201ENST00000606988 584 ntBASIC1.29□□□□□ -2.2
NUP98P52948 AC109809.1-201ENST00000619665 545 ntBASIC1.29□□□□□ -2.2
NUP98P52948 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.29□□□□□ -2.2
NUP98P52948 RNU6-884P-201ENST00000363889 107 ntBASIC1.29□□□□□ -2.2
NUP98P52948 U3.13-201ENST00000364804 214 ntBASIC1.29□□□□□ -2.2
NUP98P52948 NDUFS5P1-201ENST00000405668 289 ntBASIC1.29□□□□□ -2.2
NUP98P52948 CCNG1P1-201ENST00000406783 885 ntBASIC1.29□□□□□ -2.2
NUP98P52948 AL161449.1-201ENST00000414531 1199 ntBASIC1.29□□□□□ -2.2
NUP98P52948 ATP5J2P3-201ENST00000451550 258 ntBASIC1.29□□□□□ -2.2
NUP98P52948 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.29□□□□□ -2.2
NUP98P52948 AC093852.1-201ENST00000503587 266 ntBASIC1.29□□□□□ -2.2
NUP98P52948 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.29□□□□□ -2.2
NUP98P52948 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.29□□□□□ -2.2
NUP98P52948 RNA5SP135-201ENST00000517019 125 ntBASIC1.29□□□□□ -2.2
NUP98P52948 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.29□□□□□ -2.2
NUP98P52948 AC012435.1-202ENST00000568772 240 ntBASIC1.29□□□□□ -2.2
NUP98P52948 AC023824.3-201ENST00000569003 562 ntBASIC1.29□□□□□ -2.2
NUP98P52948 AC005034.5-201ENST00000604219 466 ntBASIC1.29□□□□□ -2.2
NUP98P52948 AL355297.2-201ENST00000604792 129 ntBASIC1.29□□□□□ -2.2
NUP98P52948 MIR5739-201ENST00000619803 80 ntBASIC1.29□□□□□ -2.2
NUP98P52948 RNU6-878P-201ENST00000384578 110 ntBASIC1.28□□□□□ -2.2
NUP98P52948 AL133264.1-201ENST00000407157 562 ntBASIC1.28□□□□□ -2.2
NUP98P52948 SRIP3-201ENST00000413200 219 ntBASIC1.28□□□□□ -2.2
NUP98P52948 MTCO3P1-205ENST00000422088 832 ntBASIC1.28□□□□□ -2.2
NUP98P52948 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.28□□□□□ -2.2
NUP98P52948 AC096920.1-201ENST00000423991 241 ntBASIC1.28□□□□□ -2.2
NUP98P52948 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
NUP98P52948 AC098831.1-201ENST00000440661 216 ntBASIC1.28□□□□□ -2.2
NUP98P52948 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.28□□□□□ -2.2
NUP98P52948 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
NUP98P52948 RNU6-551P-201ENST00000516661 103 ntBASIC1.28□□□□□ -2.2
NUP98P52948 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms