Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.37□□□□□ -2.03
MSH6P52701 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.37□□□□□ -2.03
MSH6P52701 AC093281.2-201ENST00000510153 597 ntBASIC2.37□□□□□ -2.03
MSH6P52701 AP002748.2-201ENST00000528671 348 ntBASIC2.37□□□□□ -2.03
MSH6P52701 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.37□□□□□ -2.03
MSH6P52701 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.37□□□□□ -2.03
MSH6P52701 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.37□□□□□ -2.03
MSH6P52701 AC005951.2-201ENST00000576282 495 ntBASIC2.37□□□□□ -2.03
MSH6P52701 AL078603.1-201ENST00000603824 313 ntBASIC2.37□□□□□ -2.03
MSH6P52701 AC092953.2-201ENST00000608000 699 ntBASIC2.37□□□□□ -2.03
MSH6P52701 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.37□□□□□ -2.03
MSH6P52701 AC093838.1-201ENST00000613014 469 ntBASIC2.37□□□□□ -2.03
MSH6P52701 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.37□□□□□ -2.03
MSH6P52701 AP000484.1-201ENST00000620067 1252 ntBASIC2.37□□□□□ -2.03
MSH6P52701 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.37□□□□□ -2.03
MSH6P52701 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.37□□□□□ -2.03
MSH6P52701 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
MSH6P52701 AC093536.2-201ENST00000565257 1406 ntBASIC2.37□□□□□ -2.03
MSH6P52701 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
MSH6P52701 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
MSH6P52701 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
MSH6P52701 RNU6-223P-201ENST00000362830 107 ntBASIC2.36□□□□□ -2.03
MSH6P52701 U3.20-201ENST00000390909 217 ntBASIC2.36□□□□□ -2.03
MSH6P52701 MIR320C1-201ENST00000408566 88 ntBASIC2.36□□□□□ -2.03
MSH6P52701 RN7SKP266-201ENST00000410232 287 ntBASIC2.36□□□□□ -2.03
MSH6P52701 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.36□□□□□ -2.03
MSH6P52701 AC083875.1-201ENST00000419509 405 ntBASIC2.36□□□□□ -2.03
MSH6P52701 AL512844.2-201ENST00000433990 593 ntBASIC2.36□□□□□ -2.03
MSH6P52701 RPL35AP22-201ENST00000436855 335 ntBASIC2.36□□□□□ -2.03
MSH6P52701 FGF7P5-201ENST00000441829 291 ntBASIC2.36□□□□□ -2.03
MSH6P52701 MTND4P23-201ENST00000447723 1363 ntBASIC2.36□□□□□ -2.03
MSH6P52701 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.36□□□□□ -2.03
MSH6P52701 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.36□□□□□ -2.03
MSH6P52701 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.36□□□□□ -2.03
MSH6P52701 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.36□□□□□ -2.03
MSH6P52701 RNA5SP216-201ENST00000516111 123 ntBASIC2.36□□□□□ -2.03
MSH6P52701 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.36□□□□□ -2.03
MSH6P52701 MTCO2P15-201ENST00000532655 656 ntBASIC2.36□□□□□ -2.03
MSH6P52701 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.36□□□□□ -2.03
MSH6P52701 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.36□□□□□ -2.03
MSH6P52701 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.36□□□□□ -2.03
MSH6P52701 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.36□□□□□ -2.03
MSH6P52701 SNORD53B-201ENST00000577887 78 ntBASIC2.36□□□□□ -2.03
MSH6P52701 UBE2L4-201ENST00000587688 464 ntBASIC2.36□□□□□ -2.03
MSH6P52701 VN1R82P-201ENST00000601481 356 ntBASIC2.36□□□□□ -2.03
MSH6P52701 AL139344.1-201ENST00000605228 195 ntBASIC2.36□□□□□ -2.03
MSH6P52701 AL158042.1-201ENST00000605338 460 ntBASIC2.36□□□□□ -2.03
MSH6P52701 RNU6-88P-201ENST00000606801 100 ntBASIC2.36□□□□□ -2.03
MSH6P52701 AC016597.2-201ENST00000613256 341 ntBASIC2.36□□□□□ -2.03
MSH6P52701 AL158801.5-201ENST00000623123 465 ntBASIC2.36□□□□□ -2.03
MSH6P52701 AC110079.1-202ENST00000635213 138 ntBASIC2.36□□□□□ -2.03
MSH6P52701 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.36□□□□□ -2.03
MSH6P52701 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
MSH6P52701 RNU1-39P-201ENST00000383897 165 ntBASIC2.36□□□□□ -2.03
MSH6P52701 RNU6-757P-201ENST00000410334 100 ntBASIC2.36□□□□□ -2.03
MSH6P52701 MTCO1P17-201ENST00000411522 491 ntBASIC2.36□□□□□ -2.03
MSH6P52701 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.36□□□□□ -2.03
MSH6P52701 AC099548.1-201ENST00000421443 426 ntBASIC2.36□□□□□ -2.03
MSH6P52701 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.36□□□□□ -2.03
MSH6P52701 PIGFP3-201ENST00000441918 722 ntBASIC2.36□□□□□ -2.03
MSH6P52701 BMI1P1-201ENST00000445879 941 ntBASIC2.36□□□□□ -2.03
MSH6P52701 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.36□□□□□ -2.03
MSH6P52701 AP000542.1-201ENST00000448473 371 ntBASIC2.36□□□□□ -2.03
MSH6P52701 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.36□□□□□ -2.03
MSH6P52701 AC093809.1-201ENST00000509155 340 ntBASIC2.36□□□□□ -2.03
MSH6P52701 RNA5SP220-201ENST00000516298 104 ntBASIC2.36□□□□□ -2.03
MSH6P52701 AC023538.1-201ENST00000534576 736 ntBASIC2.36□□□□□ -2.03
MSH6P52701 TRAV28-201ENST00000557548 323 ntBASIC2.36□□□□□ -2.03
MSH6P52701 AC008739.2-201ENST00000597006 317 ntBASIC2.36□□□□□ -2.03
MSH6P52701 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.36□□□□□ -2.03
MSH6P52701 TUG1_2.1-201ENST00000614234 87 ntBASIC2.36□□□□□ -2.03
MSH6P52701 AL078595.3-201ENST00000623815 1166 ntBASIC2.36□□□□□ -2.03
MSH6P52701 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.36□□□□□ -2.03
MSH6P52701 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.36□□□□□ -2.03
MSH6P52701 AC006927.4-201ENST00000639187 543 ntBASIC2.36□□□□□ -2.03
MSH6P52701 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.35□□□□□ -2.03
MSH6P52701 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
MSH6P52701 SNORA7.1-201ENST00000363750 139 ntBASIC2.35□□□□□ -2.03
MSH6P52701 SNORA4.1-201ENST00000364263 144 ntBASIC2.35□□□□□ -2.03
MSH6P52701 RNU6-157P-201ENST00000383957 107 ntBASIC2.35□□□□□ -2.03
MSH6P52701 RNU6-83P-201ENST00000384568 112 ntBASIC2.35□□□□□ -2.03
MSH6P52701 AL109755.1-201ENST00000401791 649 ntBASIC2.35□□□□□ -2.03
MSH6P52701 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
MSH6P52701 TXNP7-201ENST00000406296 293 ntBASIC2.35□□□□□ -2.03
MSH6P52701 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.35□□□□□ -2.03
MSH6P52701 RPL7P37-201ENST00000425095 738 ntBASIC2.35□□□□□ -2.03
MSH6P52701 ARPC3P1-201ENST00000437218 533 ntBASIC2.35□□□□□ -2.03
MSH6P52701 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.35□□□□□ -2.03
MSH6P52701 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.35□□□□□ -2.03
MSH6P52701 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.35□□□□□ -2.03
MSH6P52701 ATP5EP1-201ENST00000510257 156 ntBASIC2.35□□□□□ -2.03
MSH6P52701 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.35□□□□□ -2.03
MSH6P52701 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.35□□□□□ -2.03
MSH6P52701 MTND4P33-201ENST00000556706 766 ntBASIC2.35□□□□□ -2.03
MSH6P52701 AC068135.2-201ENST00000569293 1028 ntBASIC2.35□□□□□ -2.03
MSH6P52701 AC136618.2-201ENST00000575091 400 ntBASIC2.35□□□□□ -2.03
MSH6P52701 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.35□□□□□ -2.03
MSH6P52701 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.35□□□□□ -2.03
MSH6P52701 AC245884.10-201ENST00000597355 337 ntBASIC2.35□□□□□ -2.03
MSH6P52701 AL161729.4-201ENST00000604650 476 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms