Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC098591.2-201ENST00000510152 315 ntBASIC2.52□□□□□ -2.01
HCFC1P51610 RNU2-58P-201ENST00000516403 183 ntBASIC2.52□□□□□ -2.01
HCFC1P51610 RNU6-1256P-201ENST00000516539 103 ntBASIC2.52□□□□□ -2.01
HCFC1P51610 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.52□□□□□ -2.01
HCFC1P51610 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.52□□□□□ -2.01
HCFC1P51610 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.52□□□□□ -2.01
HCFC1P51610 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.52□□□□□ -2.01
HCFC1P51610 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.52□□□□□ -2.01
HCFC1P51610 AC138761.3-201ENST00000579993 334 ntBASIC2.52□□□□□ -2.01
HCFC1P51610 AC006020.1-201ENST00000420179 1854 ntBASIC2.52□□□□□ -2.01
HCFC1P51610 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
HCFC1P51610 AC103710.2-202ENST00000641454 2853 ntBASIC2.52□□□□□ -2.01
HCFC1P51610 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
HCFC1P51610 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HCFC1P51610 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HCFC1P51610 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HCFC1P51610 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.51□□□□□ -2.01
HCFC1P51610 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.51□□□□□ -2.01
HCFC1P51610 RNY4P16-201ENST00000364768 94 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 MIR34A-201ENST00000385130 110 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 SNORA40C-201ENST00000391285 128 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.51□□□□□ -2.01
HCFC1P51610 RNA5SP21-201ENST00000410917 96 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 EEF1A1P40-201ENST00000412883 573 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 NDUFB4P5-201ENST00000415445 361 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 AL139413.1-201ENST00000421309 217 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.51□□□□□ -2.01
HCFC1P51610 RPL23AP30-201ENST00000432419 501 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.51□□□□□ -2.01
HCFC1P51610 HMGB1P31-201ENST00000437242 427 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.51□□□□□ -2.01
HCFC1P51610 AC022364.2-201ENST00000457963 554 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 RNU7-63P-201ENST00000459054 62 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 RN7SL20P-201ENST00000488827 297 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 AC135721.1-201ENST00000497954 479 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 AC083906.5-201ENST00000503722 328 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 PRDX4P1-201ENST00000507189 574 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 AC117522.1-201ENST00000509821 380 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.51□□□□□ -2.01
HCFC1P51610 RNU6-64P-201ENST00000517119 105 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 RNU6-840P-201ENST00000517275 65 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.51□□□□□ -2.01
HCFC1P51610 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
HCFC1P51610 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HCFC1P51610 AC118273.2-201ENST00000532092 465 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.51□□□□□ -2.01
HCFC1P51610 AL391813.2-201ENST00000609113 322 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 AL355073.2-201ENST00000612106 557 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 AL360181.4-201ENST00000621752 134 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 AC024940.5-201ENST00000622889 474 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 AC139792.3-201ENST00000623525 224 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 FRG1KP-201ENST00000623592 341 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.51□□□□□ -2.01
HCFC1P51610 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.51□□□□□ -2.01
HCFC1P51610 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
HCFC1P51610 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HCFC1P51610 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HCFC1P51610 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.51□□□□□ -2.01
HCFC1P51610 AC110774.1-201ENST00000623567 2018 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
HCFC1P51610 Y_RNA.295-201ENST00000364918 102 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 MIR135A2-201ENST00000384854 100 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HCFC1P51610 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.51□□□□□ -2.01
HCFC1P51610 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.51□□□□□ -2.01
HCFC1P51610 MED13P1-201ENST00000428342 171 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.51□□□□□ -2.01
HCFC1P51610 RPL21P112-201ENST00000434403 463 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 AL596276.1-201ENST00000434465 418 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.51□□□□□ -2.01
HCFC1P51610 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.51□□□□□ -2.01
HCFC1P51610 FABP5P13-201ENST00000452144 328 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 TRBV1-201ENST00000476502 284 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.51□□□□□ -2.01
HCFC1P51610 AC104806.1-201ENST00000508720 308 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 RNU6-1281P-201ENST00000516223 105 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 Y_RNA.704-201ENST00000516851 102 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.51□□□□□ -2.01
HCFC1P51610 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.51□□□□□ -2.01
HCFC1P51610 AC123904.3-201ENST00000547218 814 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 AC005951.2-201ENST00000576282 495 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.51□□□□□ -2.01
HCFC1P51610 AC103710.2-201ENST00000609912 942 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 AL355810.1-201ENST00000614629 552 ntBASIC2.51□□□□□ -2.01
HCFC1P51610 FER-210ENST00000628534 558 ntTSL 5 BASIC2.51□□□□□ -2.01
HCFC1P51610 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.51□□□□□ -2.01
HCFC1P51610 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HCFC1P51610 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HCFC1P51610 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
HCFC1P51610 RNU6-50P-201ENST00000362356 103 ntBASIC2.5□□□□□ -2.01
HCFC1P51610 RNU1-35P-201ENST00000362782 153 ntBASIC2.5□□□□□ -2.01
HCFC1P51610 SNORA70B-201ENST00000384210 135 ntBASIC2.5□□□□□ -2.01
HCFC1P51610 RNU6-1158P-201ENST00000391167 107 ntBASIC2.5□□□□□ -2.01
HCFC1P51610 AC008850.1-201ENST00000427546 362 ntBASIC2.5□□□□□ -2.01
HCFC1P51610 OR2AS1P-201ENST00000427827 319 ntBASIC2.5□□□□□ -2.01
HCFC1P51610 HMGB1P27-201ENST00000431429 603 ntBASIC2.5□□□□□ -2.01
HCFC1P51610 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.5□□□□□ -2.01
HCFC1P51610 MTND5P20-201ENST00000448677 143 ntBASIC2.5□□□□□ -2.01
HCFC1P51610 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.5□□□□□ -2.01
HCFC1P51610 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms