Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC079382.1-201ENST00000493346 557 ntBASIC2.61□□□□□ -1.99
CDX1P47902 GZMAP1-201ENST00000503054 631 ntBASIC2.61□□□□□ -1.99
CDX1P47902 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.61□□□□□ -1.99
CDX1P47902 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.61□□□□□ -1.99
CDX1P47902 SNORD19.2-201ENST00000516978 73 ntBASIC2.61□□□□□ -1.99
CDX1P47902 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.61□□□□□ -1.99
CDX1P47902 PSMA2P1-201ENST00000526365 646 ntBASIC2.61□□□□□ -1.99
CDX1P47902 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.61□□□□□ -1.99
CDX1P47902 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.61□□□□□ -1.99
CDX1P47902 AC024909.2-201ENST00000553035 286 ntBASIC2.61□□□□□ -1.99
CDX1P47902 AC103810.1-201ENST00000579873 453 ntBASIC2.61□□□□□ -1.99
CDX1P47902 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.61□□□□□ -1.99
CDX1P47902 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.61□□□□□ -1.99
CDX1P47902 AL138889.2-201ENST00000603883 242 ntBASIC2.61□□□□□ -1.99
CDX1P47902 AC080013.6-201ENST00000606185 215 ntBASIC2.61□□□□□ -1.99
CDX1P47902 AC008536.2-201ENST00000607284 349 ntBASIC2.61□□□□□ -1.99
CDX1P47902 AC004908.3-201ENST00000610248 625 ntBASIC2.61□□□□□ -1.99
CDX1P47902 AL359740.1-201ENST00000624340 592 ntBASIC2.61□□□□□ -1.99
CDX1P47902 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.61□□□□□ -1.99
CDX1P47902 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CDX1P47902 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
CDX1P47902 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CDX1P47902 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CDX1P47902 AC026241.1-201ENST00000517873 2142 ntBASIC2.6□□□□□ -1.99
CDX1P47902 AC004520.1-201ENST00000608362 1413 ntBASIC2.6□□□□□ -1.99
CDX1P47902 RNU1-70P-201ENST00000362618 164 ntBASIC2.6□□□□□ -1.99
CDX1P47902 SNORA38.1-201ENST00000364172 131 ntBASIC2.6□□□□□ -1.99
CDX1P47902 RNU4-48P-201ENST00000365559 182 ntBASIC2.6□□□□□ -1.99
CDX1P47902 RNU6-898P-201ENST00000365627 104 ntBASIC2.6□□□□□ -1.99
CDX1P47902 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
CDX1P47902 Z98749.2-208ENST00000381646 500 ntBASIC2.6□□□□□ -1.99
CDX1P47902 RNU6-1179P-201ENST00000384667 107 ntBASIC2.6□□□□□ -1.99
CDX1P47902 RNU6-19P-201ENST00000384718 107 ntBASIC2.6□□□□□ -1.99
CDX1P47902 GSTA9P-201ENST00000406231 611 ntBASIC2.6□□□□□ -1.99
CDX1P47902 SNORD88.1-201ENST00000408684 91 ntBASIC2.6□□□□□ -1.99
CDX1P47902 RNU2-9P-201ENST00000410194 145 ntBASIC2.6□□□□□ -1.99
CDX1P47902 BX323014.1-201ENST00000412876 237 ntBASIC2.6□□□□□ -1.99
CDX1P47902 Z99755.1-201ENST00000414048 380 ntBASIC2.6□□□□□ -1.99
CDX1P47902 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.6□□□□□ -1.99
CDX1P47902 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.6□□□□□ -1.99
CDX1P47902 UBBP3-201ENST00000445497 241 ntBASIC2.6□□□□□ -1.99
CDX1P47902 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.6□□□□□ -1.99
CDX1P47902 AL583843.1-201ENST00000456070 346 ntBASIC2.6□□□□□ -1.99
CDX1P47902 AC022493.1-201ENST00000492984 337 ntBASIC2.6□□□□□ -1.99
CDX1P47902 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
CDX1P47902 SNORD27.1-201ENST00000516319 72 ntBASIC2.6□□□□□ -1.99
CDX1P47902 RNA5SP503-201ENST00000517047 117 ntBASIC2.6□□□□□ -1.99
CDX1P47902 RNU6-685P-201ENST00000517088 95 ntBASIC2.6□□□□□ -1.99
CDX1P47902 SNORA70.24-201ENST00000517233 118 ntBASIC2.6□□□□□ -1.99
CDX1P47902 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.6□□□□□ -1.99
CDX1P47902 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.6□□□□□ -1.99
CDX1P47902 MIR4775-201ENST00000581168 75 ntBASIC2.6□□□□□ -1.99
CDX1P47902 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.6□□□□□ -1.99
CDX1P47902 AC073657.2-201ENST00000605661 303 ntBASIC2.6□□□□□ -1.99
CDX1P47902 AC011155.2-201ENST00000623202 216 ntBASIC2.6□□□□□ -1.99
CDX1P47902 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.6□□□□□ -1.99
CDX1P47902 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CDX1P47902 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.6□□□□□ -1.99
CDX1P47902 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.6□□□□□ -1.99
CDX1P47902 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.59□□□□□ -1.99
CDX1P47902 MIR412-201ENST00000362142 91 ntBASIC2.59□□□□□ -1.99
CDX1P47902 RNU6-1120P-201ENST00000362988 108 ntBASIC2.59□□□□□ -1.99
CDX1P47902 RNU6-1180P-201ENST00000364935 107 ntBASIC2.59□□□□□ -1.99
CDX1P47902 RNU6-166P-201ENST00000384371 107 ntBASIC2.59□□□□□ -1.99
CDX1P47902 Y_RNA.582-201ENST00000391023 95 ntBASIC2.59□□□□□ -1.99
CDX1P47902 AL512633.1-201ENST00000399931 655 ntBASIC2.59□□□□□ -1.99
CDX1P47902 RNU4-47P-201ENST00000410876 114 ntBASIC2.59□□□□□ -1.99
CDX1P47902 OR6C66P-201ENST00000414917 930 ntBASIC2.59□□□□□ -1.99
CDX1P47902 RPL21P90-201ENST00000415692 466 ntBASIC2.59□□□□□ -1.99
CDX1P47902 MTCYBP5-201ENST00000423752 1135 ntBASIC2.59□□□□□ -1.99
CDX1P47902 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.59□□□□□ -1.99
CDX1P47902 RPL23AP83-201ENST00000434984 473 ntBASIC2.59□□□□□ -1.99
CDX1P47902 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.59□□□□□ -1.99
CDX1P47902 AC104058.1-201ENST00000448028 297 ntBASIC2.59□□□□□ -1.99
CDX1P47902 TPT1P7-201ENST00000458300 517 ntBASIC2.59□□□□□ -1.99
CDX1P47902 RPS29P15-201ENST00000458329 171 ntBASIC2.59□□□□□ -1.99
CDX1P47902 RPL21P41-201ENST00000459863 264 ntBASIC2.59□□□□□ -1.99
CDX1P47902 RPL23AP70-201ENST00000483361 460 ntBASIC2.59□□□□□ -1.99
CDX1P47902 FAM92A1P2-202ENST00000504766 877 ntBASIC2.59□□□□□ -1.99
CDX1P47902 AC116655.1-201ENST00000508324 901 ntBASIC2.59□□□□□ -1.99
CDX1P47902 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.59□□□□□ -1.99
CDX1P47902 MTND3P5-201ENST00000512798 333 ntBASIC2.59□□□□□ -1.99
CDX1P47902 AC112206.3-201ENST00000514578 389 ntBASIC2.59□□□□□ -1.99
CDX1P47902 SCARNA17.1-201ENST00000516211 143 ntBASIC2.59□□□□□ -1.99
CDX1P47902 SCARNA17.2-201ENST00000516334 143 ntBASIC2.59□□□□□ -1.99
CDX1P47902 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CDX1P47902 COX6CP5-201ENST00000527162 228 ntBASIC2.59□□□□□ -1.99
CDX1P47902 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CDX1P47902 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.59□□□□□ -1.99
CDX1P47902 AC015917.1-201ENST00000579654 510 ntBASIC2.59□□□□□ -1.99
CDX1P47902 MIR5692A1-201ENST00000580523 69 ntBASIC2.59□□□□□ -1.99
CDX1P47902 AC087683.1-201ENST00000591187 441 ntBASIC2.59□□□□□ -1.99
CDX1P47902 AC023043.3-201ENST00000593113 385 ntBASIC2.59□□□□□ -1.99
CDX1P47902 AC091805.2-201ENST00000603848 235 ntBASIC2.59□□□□□ -1.99
CDX1P47902 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.59□□□□□ -1.99
CDX1P47902 AL137843.1-201ENST00000605078 385 ntBASIC2.59□□□□□ -1.99
CDX1P47902 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CDX1P47902 AC007684.1-201ENST00000609671 477 ntBASIC2.59□□□□□ -1.99
CDX1P47902 SCARNA17.4-201ENST00000614296 143 ntBASIC2.59□□□□□ -1.99
CDX1P47902 MIR6134-201ENST00000617606 109 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms