Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.62□□□□□ -1.99
BRCC3P46736 RNA5SP291-201ENST00000517222 105 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.62□□□□□ -1.99
BRCC3P46736 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.62□□□□□ -1.99
BRCC3P46736 MTND1P15-201ENST00000579262 949 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 MIR3167-201ENST00000579623 85 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 MIR3611-201ENST00000584484 83 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.62□□□□□ -1.99
BRCC3P46736 AL359999.1-201ENST00000604513 294 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 RPL23AP88-201ENST00000605759 454 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 AC006566.1-201ENST00000608943 513 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 AC046143.2-201ENST00000609789 160 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 AC090970.3-201ENST00000612566 866 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 AC064859.1-201ENST00000624741 174 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.62□□□□□ -1.99
BRCC3P46736 AC110994.2-201ENST00000635481 492 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 AC006020.1-201ENST00000420179 1854 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
BRCC3P46736 RNA5SP456-201ENST00000364002 114 ntBASIC2.61□□□□□ -1.99
BRCC3P46736 Y_RNA.201-201ENST00000364052 96 ntBASIC2.61□□□□□ -1.99
BRCC3P46736 RNU6-39P-201ENST00000384344 107 ntBASIC2.61□□□□□ -1.99
BRCC3P46736 MIR325-201ENST00000385260 98 ntBASIC2.61□□□□□ -1.99
BRCC3P46736 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
BRCC3P46736 RNU6-278P-201ENST00000390945 109 ntBASIC2.61□□□□□ -1.99
BRCC3P46736 SNORA3.2-201ENST00000408221 125 ntBASIC2.61□□□□□ -1.99
BRCC3P46736 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.61□□□□□ -1.99
BRCC3P46736 RPS24P1-201ENST00000438550 371 ntBASIC2.61□□□□□ -1.99
BRCC3P46736 RPL23AP20-201ENST00000447965 421 ntBASIC2.61□□□□□ -1.99
BRCC3P46736 AC108059.3-201ENST00000456388 214 ntBASIC2.61□□□□□ -1.99
BRCC3P46736 AC087588.1-201ENST00000462203 316 ntBASIC2.61□□□□□ -1.99
BRCC3P46736 ANXA2P1-201ENST00000505539 926 ntBASIC2.61□□□□□ -1.99
BRCC3P46736 AC234781.5-201ENST00000508429 271 ntBASIC2.61□□□□□ -1.99
BRCC3P46736 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
BRCC3P46736 RNU6-927P-201ENST00000516199 100 ntBASIC2.61□□□□□ -1.99
BRCC3P46736 RNU6-390P-201ENST00000516259 103 ntBASIC2.61□□□□□ -1.99
BRCC3P46736 RNA5SP24-201ENST00000516478 95 ntBASIC2.61□□□□□ -1.99
BRCC3P46736 SNORA18.6-201ENST00000516792 115 ntBASIC2.61□□□□□ -1.99
BRCC3P46736 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.61□□□□□ -1.99
BRCC3P46736 AP002453.2-201ENST00000533503 320 ntBASIC2.61□□□□□ -1.99
BRCC3P46736 AC004486.1-201ENST00000546846 233 ntBASIC2.61□□□□□ -1.99
BRCC3P46736 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.61□□□□□ -1.99
BRCC3P46736 AL136363.1-201ENST00000605349 337 ntBASIC2.61□□□□□ -1.99
BRCC3P46736 AP001506.1-201ENST00000615444 211 ntBASIC2.61□□□□□ -1.99
BRCC3P46736 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
BRCC3P46736 Y_RNA.194-201ENST00000363985 102 ntBASIC2.6□□□□□ -1.99
BRCC3P46736 RNU4-24P-201ENST00000364565 139 ntBASIC2.6□□□□□ -1.99
BRCC3P46736 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.6□□□□□ -1.99
BRCC3P46736 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
BRCC3P46736 RNU6-14P-201ENST00000384630 106 ntBASIC2.6□□□□□ -1.99
BRCC3P46736 RPL23AP32-201ENST00000395315 459 ntBASIC2.6□□□□□ -1.99
BRCC3P46736 RNU4-53P-201ENST00000410828 140 ntBASIC2.6□□□□□ -1.99
BRCC3P46736 ELOCP17-201ENST00000414751 326 ntBASIC2.6□□□□□ -1.99
BRCC3P46736 HMGN2P30-201ENST00000423237 256 ntBASIC2.6□□□□□ -1.99
BRCC3P46736 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.6□□□□□ -1.99
BRCC3P46736 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.6□□□□□ -1.99
BRCC3P46736 KATNBL1P3-201ENST00000443475 909 ntBASIC2.6□□□□□ -1.99
BRCC3P46736 AC104389.3-201ENST00000445629 235 ntBASIC2.6□□□□□ -1.99
BRCC3P46736 MTCYBP1-201ENST00000454315 1119 ntBASIC2.6□□□□□ -1.99
BRCC3P46736 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.6□□□□□ -1.99
BRCC3P46736 snoU13.28-201ENST00000459235 104 ntBASIC2.6□□□□□ -1.99
BRCC3P46736 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.6□□□□□ -1.99
BRCC3P46736 AC126182.1-201ENST00000478134 357 ntBASIC2.6□□□□□ -1.99
BRCC3P46736 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.6□□□□□ -1.99
BRCC3P46736 RNU1-41P-201ENST00000516161 162 ntBASIC2.6□□□□□ -1.99
BRCC3P46736 RNU1-48P-201ENST00000516400 162 ntBASIC2.6□□□□□ -1.99
BRCC3P46736 RNU6-928P-201ENST00000516876 104 ntBASIC2.6□□□□□ -1.99
BRCC3P46736 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.6□□□□□ -1.99
BRCC3P46736 AC022616.3-201ENST00000523940 148 ntBASIC2.6□□□□□ -1.99
BRCC3P46736 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
BRCC3P46736 AC021269.2-201ENST00000532318 330 ntBASIC2.6□□□□□ -1.99
BRCC3P46736 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
BRCC3P46736 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.6□□□□□ -1.99
BRCC3P46736 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.6□□□□□ -1.99
BRCC3P46736 AC137800.2-201ENST00000574375 120 ntBASIC2.6□□□□□ -1.99
BRCC3P46736 AC012213.3-201ENST00000577199 777 ntBASIC2.6□□□□□ -1.99
BRCC3P46736 AC136601.2-201ENST00000604356 474 ntBASIC2.6□□□□□ -1.99
BRCC3P46736 AC064807.4-201ENST00000607201 407 ntBASIC2.6□□□□□ -1.99
BRCC3P46736 AC008498.1-201ENST00000613012 531 ntBASIC2.6□□□□□ -1.99
BRCC3P46736 AC004852.3-201ENST00000614131 326 ntBASIC2.6□□□□□ -1.99
BRCC3P46736 AL161629.2-201ENST00000615347 275 ntBASIC2.6□□□□□ -1.99
BRCC3P46736 AC092656.1-203ENST00000624134 423 ntBASIC2.6□□□□□ -1.99
BRCC3P46736 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
BRCC3P46736 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.6□□□□□ -1.99
BRCC3P46736 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
BRCC3P46736 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
BRCC3P46736 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.59□□□□□ -1.99
BRCC3P46736 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
BRCC3P46736 RNU6-1284P-201ENST00000363701 100 ntBASIC2.59□□□□□ -1.99
BRCC3P46736 RNU6-169P-201ENST00000365336 107 ntBASIC2.59□□□□□ -1.99
BRCC3P46736 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.59□□□□□ -1.99
BRCC3P46736 SNORD21-201ENST00000383953 95 ntBASIC2.59□□□□□ -1.99
BRCC3P46736 RNU6-1119P-201ENST00000384349 108 ntBASIC2.59□□□□□ -1.99
BRCC3P46736 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
BRCC3P46736 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.59□□□□□ -1.99
BRCC3P46736 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.59□□□□□ -1.99
BRCC3P46736 Z98742.3-201ENST00000418637 326 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms