Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.9□□□□□ -1.95
HNF4AP41235 AL139281.1-201ENST00000422120 335 ntBASIC2.9□□□□□ -1.95
HNF4AP41235 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.9□□□□□ -1.95
HNF4AP41235 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.9□□□□□ -1.95
HNF4AP41235 AC022018.1-201ENST00000430685 241 ntBASIC2.9□□□□□ -1.95
HNF4AP41235 HMGB1P27-201ENST00000431429 603 ntBASIC2.9□□□□□ -1.95
HNF4AP41235 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.9□□□□□ -1.95
HNF4AP41235 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.95
HNF4AP41235 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.9□□□□□ -1.95
HNF4AP41235 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.9□□□□□ -1.95
HNF4AP41235 RPS3AP14-201ENST00000483907 780 ntBASIC2.9□□□□□ -1.95
HNF4AP41235 AC026427.2-201ENST00000506228 536 ntBASIC2.9□□□□□ -1.95
HNF4AP41235 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.9□□□□□ -1.95
HNF4AP41235 SCARNA17.1-201ENST00000516211 143 ntBASIC2.9□□□□□ -1.95
HNF4AP41235 SCARNA17.2-201ENST00000516334 143 ntBASIC2.9□□□□□ -1.95
HNF4AP41235 RNU6-1220P-201ENST00000517126 108 ntBASIC2.9□□□□□ -1.95
HNF4AP41235 RNA5SP165-201ENST00000517142 115 ntBASIC2.9□□□□□ -1.95
HNF4AP41235 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.9□□□□□ -1.95
HNF4AP41235 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.9□□□□□ -1.95
HNF4AP41235 FAM92A1P1-201ENST00000528023 890 ntBASIC2.9□□□□□ -1.95
HNF4AP41235 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HNF4AP41235 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.9□□□□□ -1.95
HNF4AP41235 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.9□□□□□ -1.95
HNF4AP41235 AC136619.2-201ENST00000563361 631 ntBASIC2.9□□□□□ -1.95
HNF4AP41235 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.9□□□□□ -1.95
HNF4AP41235 AC012119.1-201ENST00000603184 222 ntBASIC2.9□□□□□ -1.95
HNF4AP41235 AC245014.2-201ENST00000603689 287 ntBASIC2.9□□□□□ -1.95
HNF4AP41235 AC098826.3-201ENST00000603823 466 ntBASIC2.9□□□□□ -1.95
HNF4AP41235 AL355598.1-201ENST00000604169 202 ntBASIC2.9□□□□□ -1.95
HNF4AP41235 AC246785.4-201ENST00000605374 287 ntBASIC2.9□□□□□ -1.95
HNF4AP41235 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.9□□□□□ -1.95
HNF4AP41235 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.9□□□□□ -1.95
HNF4AP41235 AC068944.2-201ENST00000610373 403 ntBASIC2.9□□□□□ -1.95
HNF4AP41235 SCARNA17.4-201ENST00000614296 143 ntBASIC2.9□□□□□ -1.95
HNF4AP41235 AL162274.2-201ENST00000614406 332 ntBASIC2.9□□□□□ -1.95
HNF4AP41235 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.9□□□□□ -1.95
HNF4AP41235 ATP5A1P2-202ENST00000616464 443 ntBASIC2.9□□□□□ -1.95
HNF4AP41235 MIR8057-201ENST00000620957 69 ntBASIC2.9□□□□□ -1.95
HNF4AP41235 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.9□□□□□ -1.95
HNF4AP41235 AL157786.1-207ENST00000627771 695 ntBASIC2.9□□□□□ -1.95
HNF4AP41235 MIR6863-201ENST00000636112 90 ntBASIC2.9□□□□□ -1.95
HNF4AP41235 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
HNF4AP41235 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
HNF4AP41235 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HNF4AP41235 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HNF4AP41235 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
HNF4AP41235 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.89□□□□□ -1.95
HNF4AP41235 OR4G2P-201ENST00000328113 903 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 MIR422A-201ENST00000362286 90 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 RNU6-181P-201ENST00000363225 107 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 RNU6-778P-201ENST00000363269 103 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 RNY3P13-201ENST00000365542 102 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 RPL17P50-201ENST00000396131 546 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 CALM2P3-201ENST00000400429 449 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 RNU2-8P-201ENST00000410727 190 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.89□□□□□ -1.95
HNF4AP41235 RPS15AP12-201ENST00000419498 388 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 EIF1P1-201ENST00000421436 341 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.89□□□□□ -1.95
HNF4AP41235 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.89□□□□□ -1.95
HNF4AP41235 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HNF4AP41235 MTCO2P11-201ENST00000431069 680 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 GPM6BP2-201ENST00000432046 144 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 USP9YP15-201ENST00000442391 422 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 RPS3AP12-201ENST00000443616 753 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 GPM6BP1-201ENST00000446387 144 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 AC132479.1-201ENST00000449160 144 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.89□□□□□ -1.95
HNF4AP41235 C1DP4-201ENST00000455429 424 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 AC128713.1-201ENST00000471495 306 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.89□□□□□ -1.95
HNF4AP41235 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
HNF4AP41235 AC098591.2-201ENST00000510152 315 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 RNU5F-8P-201ENST00000515941 111 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 Vault.3-201ENST00000516676 95 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 RNU6-445P-201ENST00000516949 107 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 RNA5SP337-201ENST00000517007 109 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 AC022616.3-201ENST00000523940 148 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.89□□□□□ -1.95
HNF4AP41235 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.89□□□□□ -1.95
HNF4AP41235 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.89□□□□□ -1.95
HNF4AP41235 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.89□□□□□ -1.95
HNF4AP41235 MIR4293-201ENST00000584305 78 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 BNIP3P22-201ENST00000593399 556 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.89□□□□□ -1.95
HNF4AP41235 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.89□□□□□ -1.95
HNF4AP41235 KC877982.1-201ENST00000602313 470 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 MIR98-201ENST00000606724 119 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 AC069234.5-201ENST00000611056 416 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 AC007318.2-201ENST00000620999 243 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 U2.21-201ENST00000637295 81 ntBASIC2.89□□□□□ -1.95
HNF4AP41235 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HNF4AP41235 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
HNF4AP41235 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HNF4AP41235 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.88□□□□□ -1.95
HNF4AP41235 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
HNF4AP41235 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.88□□□□□ -1.95
HNF4AP41235 SNORA71.1-201ENST00000364523 117 ntBASIC2.88□□□□□ -1.95
HNF4AP41235 RNU6-169P-201ENST00000365336 107 ntBASIC2.88□□□□□ -1.95
HNF4AP41235 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms