Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 BTF3P8-201ENST00000414577 526 ntBASIC0.69□□□□□ -2.3
SNCAP37840 RPS3AP22-201ENST00000488297 769 ntBASIC0.69□□□□□ -2.3
SNCAP37840 AL133373.1-201ENST00000497098 94 ntBASIC0.69□□□□□ -2.3
SNCAP37840 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.69□□□□□ -2.3
SNCAP37840 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.69□□□□□ -2.3
SNCAP37840 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.69□□□□□ -2.3
SNCAP37840 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.69□□□□□ -2.3
SNCAP37840 AC012360.2-201ENST00000609349 391 ntBASIC0.69□□□□□ -2.3
SNCAP37840 AL355472.4-201ENST00000610233 626 ntBASIC0.69□□□□□ -2.3
SNCAP37840 AC007490.1-201ENST00000624321 703 ntBASIC0.69□□□□□ -2.3
SNCAP37840 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.68□□□□□ -2.3
SNCAP37840 RNU6-140P-201ENST00000384566 108 ntBASIC0.68□□□□□ -2.3
SNCAP37840 RNU6-1222P-201ENST00000384615 107 ntBASIC0.68□□□□□ -2.3
SNCAP37840 MIR532-201ENST00000385025 91 ntBASIC0.68□□□□□ -2.3
SNCAP37840 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
SNCAP37840 RN7SKP61-201ENST00000410642 295 ntBASIC0.68□□□□□ -2.3
SNCAP37840 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC0.68□□□□□ -2.3
SNCAP37840 C1DP1-201ENST00000426049 402 ntBASIC0.68□□□□□ -2.3
SNCAP37840 ZYG11AP1-201ENST00000430329 837 ntBASIC0.68□□□□□ -2.3
SNCAP37840 AC092473.1-201ENST00000441098 221 ntBASIC0.68□□□□□ -2.3
SNCAP37840 MTCO1P53-201ENST00000441633 699 ntBASIC0.68□□□□□ -2.3
SNCAP37840 AC092685.1-201ENST00000447960 1243 ntBASIC0.68□□□□□ -2.3
SNCAP37840 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.68□□□□□ -2.3
SNCAP37840 RFC5P1-201ENST00000454419 874 ntBASIC0.68□□□□□ -2.3
SNCAP37840 snoU13.9-201ENST00000458927 103 ntBASIC0.68□□□□□ -2.3
SNCAP37840 RPL9P9-202ENST00000466501 579 ntBASIC0.68□□□□□ -2.3
SNCAP37840 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.68□□□□□ -2.3
SNCAP37840 RNU6-351P-201ENST00000516097 100 ntBASIC0.68□□□□□ -2.3
SNCAP37840 RNA5SP404-201ENST00000517118 132 ntBASIC0.68□□□□□ -2.3
SNCAP37840 SNORA31.22-201ENST00000517204 135 ntBASIC0.68□□□□□ -2.3
SNCAP37840 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.68□□□□□ -2.3
SNCAP37840 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.68□□□□□ -2.3
SNCAP37840 AL731537.2-201ENST00000561565 951 ntBASIC0.68□□□□□ -2.3
SNCAP37840 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.68□□□□□ -2.3
SNCAP37840 MIR4524B-201ENST00000581569 115 ntBASIC0.68□□□□□ -2.3
SNCAP37840 AC123912.5-201ENST00000605470 343 ntBASIC0.68□□□□□ -2.3
SNCAP37840 AC004492.1-201ENST00000607036 742 ntBASIC0.68□□□□□ -2.3
SNCAP37840 AC097468.3-201ENST00000607956 456 ntBASIC0.68□□□□□ -2.3
SNCAP37840 MIR6857-201ENST00000613267 93 ntBASIC0.68□□□□□ -2.3
SNCAP37840 AC008121.3-201ENST00000618726 433 ntBASIC0.68□□□□□ -2.3
SNCAP37840 AC012676.2-201ENST00000619258 186 ntBASIC0.68□□□□□ -2.3
SNCAP37840 AL121890.5-201ENST00000620848 304 ntBASIC0.68□□□□□ -2.3
SNCAP37840 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.67□□□□□ -2.3
SNCAP37840 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
SNCAP37840 MIR515-2-201ENST00000384883 83 ntBASIC0.67□□□□□ -2.3
SNCAP37840 MIR515-1-201ENST00000384884 83 ntBASIC0.67□□□□□ -2.3
SNCAP37840 RNA5SP501-201ENST00000410990 112 ntBASIC0.67□□□□□ -2.3
SNCAP37840 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.67□□□□□ -2.3
SNCAP37840 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.67□□□□□ -2.3
SNCAP37840 PNRC2P1-201ENST00000423940 420 ntBASIC0.67□□□□□ -2.3
SNCAP37840 CST2P1-201ENST00000425770 87 ntBASIC0.67□□□□□ -2.3
SNCAP37840 AC008850.1-201ENST00000427546 362 ntBASIC0.67□□□□□ -2.3
SNCAP37840 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.67□□□□□ -2.3
SNCAP37840 MTCO1P44-201ENST00000441935 243 ntBASIC0.67□□□□□ -2.3
SNCAP37840 UBL5P1-201ENST00000507979 193 ntBASIC0.67□□□□□ -2.3
SNCAP37840 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.67□□□□□ -2.3
SNCAP37840 CBX3P8-201ENST00000532412 525 ntBASIC0.67□□□□□ -2.3
SNCAP37840 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.67□□□□□ -2.3
SNCAP37840 AC004217.3-201ENST00000551552 878 ntBASIC0.67□□□□□ -2.3
SNCAP37840 AC090115.3-201ENST00000553218 849 ntBASIC0.67□□□□□ -2.3
SNCAP37840 AC009268.1-201ENST00000561352 1203 ntBASIC0.67□□□□□ -2.3
SNCAP37840 AC136932.1-201ENST00000574771 208 ntBASIC0.67□□□□□ -2.3
SNCAP37840 SUMO2P14-201ENST00000604488 293 ntBASIC0.67□□□□□ -2.3
SNCAP37840 AC106800.4-201ENST00000614905 153 ntBASIC0.67□□□□□ -2.3
SNCAP37840 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.67□□□□□ -2.3
SNCAP37840 MIR6866-201ENST00000638146 69 ntBASIC0.67□□□□□ -2.3
SNCAP37840 RBBP8P1-201ENST00000449447 1844 ntBASIC0.66□□□□□ -2.3
SNCAP37840 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
SNCAP37840 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
SNCAP37840 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
SNCAP37840 RNU6-543P-201ENST00000362576 108 ntBASIC0.66□□□□□ -2.3
SNCAP37840 RNU6-386P-201ENST00000362650 107 ntBASIC0.66□□□□□ -2.3
SNCAP37840 RNU1-22P-201ENST00000363334 158 ntBASIC0.66□□□□□ -2.3
SNCAP37840 RNU6-271P-201ENST00000363858 105 ntBASIC0.66□□□□□ -2.3
SNCAP37840 RNU6-152P-201ENST00000384037 107 ntBASIC0.66□□□□□ -2.3
SNCAP37840 AL136133.1-201ENST00000413694 376 ntBASIC0.66□□□□□ -2.3
SNCAP37840 AC018630.2-202ENST00000422992 927 ntBASIC0.66□□□□□ -2.3
SNCAP37840 CR848007.2-201ENST00000424918 787 ntBASIC0.66□□□□□ -2.3
SNCAP37840 KATNBL1P6-201ENST00000453433 915 ntBASIC0.66□□□□□ -2.3
SNCAP37840 RPS26P55-201ENST00000471178 356 ntBASIC0.66□□□□□ -2.3
SNCAP37840 AL121594.1-201ENST00000475906 575 ntBASIC0.66□□□□□ -2.3
SNCAP37840 AL049874.1-201ENST00000489560 388 ntBASIC0.66□□□□□ -2.3
SNCAP37840 AC018437.1-201ENST00000492214 406 ntBASIC0.66□□□□□ -2.3
SNCAP37840 RPS27AP10-201ENST00000496103 208 ntBASIC0.66□□□□□ -2.3
SNCAP37840 CKS1BP2-201ENST00000497342 240 ntBASIC0.66□□□□□ -2.3
SNCAP37840 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.66□□□□□ -2.3
SNCAP37840 SMURF2P1-201ENST00000514992 481 ntBASIC0.66□□□□□ -2.3
SNCAP37840 RNU6-491P-201ENST00000516099 110 ntBASIC0.66□□□□□ -2.3
SNCAP37840 CR383656.7-201ENST00000548164 174 ntBASIC0.66□□□□□ -2.3
SNCAP37840 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.66□□□□□ -2.3
SNCAP37840 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.66□□□□□ -2.3
SNCAP37840 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.66□□□□□ -2.3
SNCAP37840 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.66□□□□□ -2.3
SNCAP37840 AC098848.2-201ENST00000588023 330 ntBASIC0.66□□□□□ -2.3
SNCAP37840 AC080078.3-201ENST00000605407 463 ntBASIC0.66□□□□□ -2.3
SNCAP37840 AL020996.3-201ENST00000606617 222 ntBASIC0.66□□□□□ -2.3
SNCAP37840 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
SNCAP37840 MIR302D-201ENST00000362275 68 ntBASIC0.65□□□□□ -2.31
SNCAP37840 RNU6-439P-201ENST00000384188 106 ntBASIC0.65□□□□□ -2.31
SNCAP37840 AL109755.1-201ENST00000401791 649 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms