Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RNU6-348P-201ENST00000384386 107 ntBASIC3.14□□□□□ -1.91
HOXC13P31276 SNORA46-201ENST00000384762 135 ntBASIC3.14□□□□□ -1.91
HOXC13P31276 U8.14-201ENST00000390843 143 ntBASIC3.14□□□□□ -1.91
HOXC13P31276 RNU2-33P-201ENST00000410344 192 ntBASIC3.14□□□□□ -1.91
HOXC13P31276 RNU2-41P-201ENST00000410991 178 ntBASIC3.14□□□□□ -1.91
HOXC13P31276 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXC13P31276 SDCBPP3-201ENST00000419629 891 ntBASIC3.14□□□□□ -1.91
HOXC13P31276 RPS27AP14-201ENST00000422868 454 ntBASIC3.14□□□□□ -1.91
HOXC13P31276 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.14□□□□□ -1.91
HOXC13P31276 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.14□□□□□ -1.91
HOXC13P31276 AC108059.3-201ENST00000456388 214 ntBASIC3.14□□□□□ -1.91
HOXC13P31276 MTCO1P42-201ENST00000457379 726 ntBASIC3.14□□□□□ -1.91
HOXC13P31276 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXC13P31276 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.14□□□□□ -1.91
HOXC13P31276 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXC13P31276 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXC13P31276 COX6CP5-201ENST00000527162 228 ntBASIC3.14□□□□□ -1.91
HOXC13P31276 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.14□□□□□ -1.91
HOXC13P31276 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.14□□□□□ -1.91
HOXC13P31276 RAB11AP2-201ENST00000545905 639 ntBASIC3.14□□□□□ -1.91
HOXC13P31276 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.14□□□□□ -1.91
HOXC13P31276 ZNF519P2-201ENST00000557032 169 ntBASIC3.14□□□□□ -1.91
HOXC13P31276 MIR4319-201ENST00000577285 85 ntBASIC3.14□□□□□ -1.91
HOXC13P31276 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXC13P31276 AL449363.1-201ENST00000617815 186 ntBASIC3.14□□□□□ -1.91
HOXC13P31276 SNHG22-203ENST00000617833 660 ntBASIC3.14□□□□□ -1.91
HOXC13P31276 AC006338.1-201ENST00000618453 749 ntBASIC3.14□□□□□ -1.91
HOXC13P31276 AC025048.6-202ENST00000627667 438 ntBASIC3.14□□□□□ -1.91
HOXC13P31276 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXC13P31276 ZNF680P1-201ENST00000436625 1469 ntBASIC3.14□□□□□ -1.91
HOXC13P31276 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HOXC13P31276 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HOXC13P31276 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXC13P31276 FTLP6-201ENST00000355274 422 ntBASIC3.13□□□□□ -1.91
HOXC13P31276 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HOXC13P31276 AL139095.1-201ENST00000404326 391 ntBASIC3.13□□□□□ -1.91
HOXC13P31276 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXC13P31276 AC138393.2-201ENST00000414742 246 ntBASIC3.13□□□□□ -1.91
HOXC13P31276 USP9YP20-201ENST00000419224 558 ntBASIC3.13□□□□□ -1.91
HOXC13P31276 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXC13P31276 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXC13P31276 AL139281.1-201ENST00000422120 335 ntBASIC3.13□□□□□ -1.91
HOXC13P31276 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXC13P31276 MTND3P21-201ENST00000433774 331 ntBASIC3.13□□□□□ -1.91
HOXC13P31276 MTND4LP16-201ENST00000440828 295 ntBASIC3.13□□□□□ -1.91
HOXC13P31276 COX6CP12-201ENST00000446748 202 ntBASIC3.13□□□□□ -1.91
HOXC13P31276 SSXP1-201ENST00000453640 473 ntBASIC3.13□□□□□ -1.91
HOXC13P31276 AC117440.1-201ENST00000474107 571 ntBASIC3.13□□□□□ -1.91
HOXC13P31276 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXC13P31276 RNU6-1153P-201ENST00000516760 105 ntBASIC3.13□□□□□ -1.91
HOXC13P31276 AC245166.1-201ENST00000521012 253 ntBASIC3.13□□□□□ -1.91
HOXC13P31276 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.13□□□□□ -1.91
HOXC13P31276 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXC13P31276 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.13□□□□□ -1.91
HOXC13P31276 AC079600.2-201ENST00000550076 130 ntBASIC3.13□□□□□ -1.91
HOXC13P31276 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.13□□□□□ -1.91
HOXC13P31276 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXC13P31276 PCMTD1P2-201ENST00000565017 355 ntBASIC3.13□□□□□ -1.91
HOXC13P31276 AL161734.1-201ENST00000609720 557 ntBASIC3.13□□□□□ -1.91
HOXC13P31276 AC000403.1-201ENST00000613696 3585 ntBASIC3.13□□□□□ -1.91
HOXC13P31276 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HOXC13P31276 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXC13P31276 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXC13P31276 MIR22-201ENST00000362190 85 ntBASIC3.12□□□□□ -1.91
HOXC13P31276 RNU6-181P-201ENST00000363225 107 ntBASIC3.12□□□□□ -1.91
HOXC13P31276 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.12□□□□□ -1.91
HOXC13P31276 AL512633.1-201ENST00000399931 655 ntBASIC3.12□□□□□ -1.91
HOXC13P31276 MIR888-201ENST00000401186 77 ntBASIC3.12□□□□□ -1.91
HOXC13P31276 AC078974.1-201ENST00000411597 223 ntBASIC3.12□□□□□ -1.91
HOXC13P31276 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HOXC13P31276 RPL17P12-201ENST00000413391 526 ntBASIC3.12□□□□□ -1.91
HOXC13P31276 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXC13P31276 USP9YP8-201ENST00000441913 500 ntBASIC3.12□□□□□ -1.91
HOXC13P31276 AC009296.1-201ENST00000443146 155 ntBASIC3.12□□□□□ -1.91
HOXC13P31276 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXC13P31276 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXC13P31276 AL160314.1-201ENST00000490836 438 ntBASIC3.12□□□□□ -1.91
HOXC13P31276 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
HOXC13P31276 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HOXC13P31276 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXC13P31276 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXC13P31276 SCARNA15.1-201ENST00000516384 125 ntBASIC3.12□□□□□ -1.91
HOXC13P31276 RNU6-1003P-201ENST00000517099 105 ntBASIC3.12□□□□□ -1.91
HOXC13P31276 AC100870.1-201ENST00000522035 505 ntBASIC3.12□□□□□ -1.91
HOXC13P31276 OR5AL2P-201ENST00000532185 920 ntBASIC3.12□□□□□ -1.91
HOXC13P31276 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXC13P31276 AC044792.1-201ENST00000593294 196 ntBASIC3.12□□□□□ -1.91
HOXC13P31276 AC090578.1-201ENST00000604955 591 ntBASIC3.12□□□□□ -1.91
HOXC13P31276 AL355472.4-201ENST00000610233 626 ntBASIC3.12□□□□□ -1.91
HOXC13P31276 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
HOXC13P31276 DUXAP9-208ENST00000622815 614 ntBASIC3.12□□□□□ -1.91
HOXC13P31276 AL136360.1-201ENST00000503377 1900 ntBASIC3.12□□□□□ -1.91
HOXC13P31276 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXC13P31276 MTND5P26-201ENST00000426018 1752 ntBASIC3.12□□□□□ -1.91
HOXC13P31276 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXC13P31276 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXC13P31276 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
HOXC13P31276 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
HOXC13P31276 AC004972.1-201ENST00000623934 2209 ntBASIC3.11□□□□□ -1.91
HOXC13P31276 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms