Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC010809.3-201ENST00000621310 641 ntBASIC0.82□□□□□ -2.28
CLIP1P30622 OR4G3P-201ENST00000633500 913 ntBASIC0.82□□□□□ -2.28
CLIP1P30622 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.81□□□□□ -2.28
CLIP1P30622 AL109913.1-201ENST00000421173 514 ntBASIC0.81□□□□□ -2.28
CLIP1P30622 USP9YP35-201ENST00000435696 412 ntBASIC0.81□□□□□ -2.28
CLIP1P30622 AP002371.1-201ENST00000463604 433 ntBASIC0.81□□□□□ -2.28
CLIP1P30622 7SK.7-201ENST00000603504 247 ntBASIC0.81□□□□□ -2.28
CLIP1P30622 RMST_5.1-201ENST00000618704 126 ntBASIC0.81□□□□□ -2.28
CLIP1P30622 AP006248.3-201ENST00000623580 594 ntBASIC0.81□□□□□ -2.28
CLIP1P30622 AC092192.1-201ENST00000633154 1018 ntBASIC0.81□□□□□ -2.28
CLIP1P30622 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
CLIP1P30622 HMGN2P39-201ENST00000398005 273 ntBASIC0.81□□□□□ -2.28
CLIP1P30622 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.81□□□□□ -2.28
CLIP1P30622 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC0.81□□□□□ -2.28
CLIP1P30622 RNU7-23P-201ENST00000459465 62 ntBASIC0.81□□□□□ -2.28
CLIP1P30622 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.81□□□□□ -2.28
CLIP1P30622 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.81□□□□□ -2.28
CLIP1P30622 AC074051.3-201ENST00000570238 358 ntBASIC0.81□□□□□ -2.28
CLIP1P30622 AP003399.1-201ENST00000637534 361 ntBASIC0.81□□□□□ -2.28
CLIP1P30622 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.8□□□□□ -2.28
CLIP1P30622 RNU6-775P-201ENST00000459318 96 ntBASIC0.8□□□□□ -2.28
CLIP1P30622 HAR1A.1-201ENST00000459583 118 ntBASIC0.8□□□□□ -2.28
CLIP1P30622 AK3P2-201ENST00000507976 429 ntBASIC0.8□□□□□ -2.28
CLIP1P30622 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
CLIP1P30622 LRRC34P2-201ENST00000514850 553 ntBASIC0.8□□□□□ -2.28
CLIP1P30622 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.8□□□□□ -2.28
CLIP1P30622 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.8□□□□□ -2.28
CLIP1P30622 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.8□□□□□ -2.28
CLIP1P30622 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.8□□□□□ -2.28
CLIP1P30622 AL133241.1-201ENST00000556832 487 ntBASIC0.8□□□□□ -2.28
CLIP1P30622 HMGB1P14-201ENST00000557424 591 ntBASIC0.8□□□□□ -2.28
CLIP1P30622 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.8□□□□□ -2.28
CLIP1P30622 NIFKP6-201ENST00000598115 845 ntBASIC0.8□□□□□ -2.28
CLIP1P30622 AC068276.1-201ENST00000605793 379 ntBASIC0.8□□□□□ -2.28
CLIP1P30622 MTND5P11-201ENST00000511037 1812 ntBASIC0.79□□□□□ -2.28
CLIP1P30622 AC016716.1-201ENST00000265882 708 ntBASIC0.79□□□□□ -2.28
CLIP1P30622 Y_RNA.67-201ENST00000362870 100 ntBASIC0.79□□□□□ -2.28
CLIP1P30622 U3.13-201ENST00000364804 214 ntBASIC0.79□□□□□ -2.28
CLIP1P30622 VTRNA1-3-201ENST00000365645 89 ntBASIC0.79□□□□□ -2.28
CLIP1P30622 Y_RNA.493-201ENST00000384422 102 ntBASIC0.79□□□□□ -2.28
CLIP1P30622 MIR30A-201ENST00000385092 71 ntBASIC0.79□□□□□ -2.28
CLIP1P30622 SNORA81-201ENST00000408493 178 ntBASIC0.79□□□□□ -2.28
CLIP1P30622 RNU6-1328P-201ENST00000410938 106 ntBASIC0.79□□□□□ -2.28
CLIP1P30622 PRPS1P1-201ENST00000445305 876 ntBASIC0.79□□□□□ -2.28
CLIP1P30622 OR52A4P-202ENST00000481634 799 ntBASIC0.79□□□□□ -2.28
CLIP1P30622 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.79□□□□□ -2.28
CLIP1P30622 RNU11-2P-201ENST00000516898 142 ntBASIC0.79□□□□□ -2.28
CLIP1P30622 RNA5SP337-201ENST00000517007 109 ntBASIC0.79□□□□□ -2.28
CLIP1P30622 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.79□□□□□ -2.28
CLIP1P30622 AC022254.1-201ENST00000567857 235 ntBASIC0.79□□□□□ -2.28
CLIP1P30622 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.79□□□□□ -2.28
CLIP1P30622 AC018638.7-201ENST00000605836 1114 ntBASIC0.79□□□□□ -2.28
CLIP1P30622 AL590410.1-201ENST00000617925 333 ntBASIC0.79□□□□□ -2.28
CLIP1P30622 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC0.79□□□□□ -2.28
CLIP1P30622 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.79□□□□□ -2.28
CLIP1P30622 AL049737.1-201ENST00000413920 1403 ntBASIC0.78□□□□□ -2.28
CLIP1P30622 RNA5SP258-201ENST00000362750 119 ntBASIC0.78□□□□□ -2.28
CLIP1P30622 RNU6-374P-201ENST00000364146 108 ntBASIC0.78□□□□□ -2.28
CLIP1P30622 RNU6-1222P-201ENST00000384615 107 ntBASIC0.78□□□□□ -2.28
CLIP1P30622 RNA5SP511-201ENST00000410487 115 ntBASIC0.78□□□□□ -2.28
CLIP1P30622 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC0.78□□□□□ -2.28
CLIP1P30622 AL606490.4-201ENST00000423117 127 ntBASIC0.78□□□□□ -2.28
CLIP1P30622 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.78□□□□□ -2.28
CLIP1P30622 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.78□□□□□ -2.28
CLIP1P30622 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.78□□□□□ -2.28
CLIP1P30622 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC0.78□□□□□ -2.28
CLIP1P30622 MTND4LP3-201ENST00000468320 276 ntBASIC0.78□□□□□ -2.28
CLIP1P30622 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.78□□□□□ -2.28
CLIP1P30622 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.78□□□□□ -2.28
CLIP1P30622 AC243829.6-201ENST00000612652 106 ntBASIC0.78□□□□□ -2.28
CLIP1P30622 FRG1HP-204ENST00000617940 757 ntBASIC0.78□□□□□ -2.28
CLIP1P30622 AL513185.3-201ENST00000433335 1300 ntBASIC0.77□□□□□ -2.29
CLIP1P30622 HSBP1P2-201ENST00000299671 229 ntBASIC0.77□□□□□ -2.29
CLIP1P30622 RNA5SP125-201ENST00000364843 120 ntBASIC0.77□□□□□ -2.29
CLIP1P30622 MTND6P13-201ENST00000443510 523 ntBASIC0.77□□□□□ -2.29
CLIP1P30622 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC0.77□□□□□ -2.29
CLIP1P30622 UBL5P1-201ENST00000507979 193 ntBASIC0.77□□□□□ -2.29
CLIP1P30622 MTCO2P22-201ENST00000603246 681 ntBASIC0.77□□□□□ -2.29
CLIP1P30622 MIR5087-201ENST00000635826 76 ntBASIC0.77□□□□□ -2.29
CLIP1P30622 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CLIP1P30622 RPL23AP32-201ENST00000395315 459 ntBASIC0.76□□□□□ -2.29
CLIP1P30622 RNA5SP56-201ENST00000410277 118 ntBASIC0.76□□□□□ -2.29
CLIP1P30622 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.76□□□□□ -2.29
CLIP1P30622 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC0.76□□□□□ -2.29
CLIP1P30622 AL590365.1-201ENST00000450788 243 ntBASIC0.76□□□□□ -2.29
CLIP1P30622 AC093677.1-201ENST00000514414 678 ntBASIC0.76□□□□□ -2.29
CLIP1P30622 RNU6-322P-201ENST00000516010 103 ntBASIC0.76□□□□□ -2.29
CLIP1P30622 AP003355.1-201ENST00000518956 587 ntBASIC0.76□□□□□ -2.29
CLIP1P30622 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC0.76□□□□□ -2.29
CLIP1P30622 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC0.76□□□□□ -2.29
CLIP1P30622 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CLIP1P30622 RNU6-222P-201ENST00000362438 107 ntBASIC0.75□□□□□ -2.29
CLIP1P30622 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.75□□□□□ -2.29
CLIP1P30622 UBE2V2P3-201ENST00000433562 437 ntBASIC0.75□□□□□ -2.29
CLIP1P30622 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.75□□□□□ -2.29
CLIP1P30622 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.75□□□□□ -2.29
CLIP1P30622 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.75□□□□□ -2.29
CLIP1P30622 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC0.75□□□□□ -2.29
CLIP1P30622 MIR4422-201ENST00000581938 83 ntBASIC0.75□□□□□ -2.29
CLIP1P30622 AL669831.4-202ENST00000590817 238 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms