Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
ABCD3P28288 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.11□□□□□ -1.91
ABCD3P28288 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ABCD3P28288 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.1□□□□□ -1.91
ABCD3P28288 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.1□□□□□ -1.91
ABCD3P28288 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.1□□□□□ -1.91
ABCD3P28288 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
ABCD3P28288 MTND5P27-201ENST00000428871 1720 ntBASIC3.1□□□□□ -1.91
ABCD3P28288 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
ABCD3P28288 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ABCD3P28288 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.1□□□□□ -1.91
ABCD3P28288 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ABCD3P28288 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ABCD3P28288 RNU6-805P-201ENST00000365643 106 ntBASIC3.1□□□□□ -1.91
ABCD3P28288 Z98749.2-208ENST00000381646 500 ntBASIC3.1□□□□□ -1.91
ABCD3P28288 MIR34A-201ENST00000385130 110 ntBASIC3.1□□□□□ -1.91
ABCD3P28288 RNA5SP293-201ENST00000410527 113 ntBASIC3.1□□□□□ -1.91
ABCD3P28288 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.1□□□□□ -1.91
ABCD3P28288 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.1□□□□□ -1.91
ABCD3P28288 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.1□□□□□ -1.91
ABCD3P28288 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.1□□□□□ -1.91
ABCD3P28288 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.1□□□□□ -1.91
ABCD3P28288 OR2B8P-201ENST00000432841 938 ntBASIC3.1□□□□□ -1.91
ABCD3P28288 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.1□□□□□ -1.91
ABCD3P28288 AC010401.1-201ENST00000463867 348 ntBASIC3.1□□□□□ -1.91
ABCD3P28288 CENPBD1P1-201ENST00000464061 469 ntBASIC3.1□□□□□ -1.91
ABCD3P28288 RN7SL442P-201ENST00000473804 320 ntBASIC3.1□□□□□ -1.91
ABCD3P28288 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.1□□□□□ -1.91
ABCD3P28288 SEM1P1-201ENST00000506694 209 ntBASIC3.1□□□□□ -1.91
ABCD3P28288 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.1□□□□□ -1.91
ABCD3P28288 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.1□□□□□ -1.91
ABCD3P28288 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.1□□□□□ -1.91
ABCD3P28288 AL137161.1-201ENST00000532231 390 ntBASIC3.1□□□□□ -1.91
ABCD3P28288 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.1□□□□□ -1.91
ABCD3P28288 AC016957.1-201ENST00000534895 309 ntBASIC3.1□□□□□ -1.91
ABCD3P28288 HIF1AP1-201ENST00000553642 175 ntBASIC3.1□□□□□ -1.91
ABCD3P28288 AC005476.1-201ENST00000554427 397 ntBASIC3.1□□□□□ -1.91
ABCD3P28288 AL512360.1-201ENST00000555346 234 ntBASIC3.1□□□□□ -1.91
ABCD3P28288 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.1□□□□□ -1.91
ABCD3P28288 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.1□□□□□ -1.91
ABCD3P28288 AC007151.1-201ENST00000572774 483 ntBASIC3.1□□□□□ -1.91
ABCD3P28288 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.1□□□□□ -1.91
ABCD3P28288 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.1□□□□□ -1.91
ABCD3P28288 MIR3944-201ENST00000581277 108 ntBASIC3.1□□□□□ -1.91
ABCD3P28288 MIR4276-201ENST00000584832 70 ntBASIC3.1□□□□□ -1.91
ABCD3P28288 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ABCD3P28288 AC069200.1-201ENST00000609511 323 ntBASIC3.1□□□□□ -1.91
ABCD3P28288 U4.5-201ENST00000617137 123 ntBASIC3.1□□□□□ -1.91
ABCD3P28288 AC002064.3-201ENST00000623448 346 ntBASIC3.1□□□□□ -1.91
ABCD3P28288 AC010889.1-201ENST00000566193 2666 ntBASIC3.1□□□□□ -1.91
ABCD3P28288 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ABCD3P28288 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ABCD3P28288 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
ABCD3P28288 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
ABCD3P28288 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
ABCD3P28288 AC017071.1-201ENST00000564407 2204 ntBASIC3.09□□□□□ -1.91
ABCD3P28288 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
ABCD3P28288 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
ABCD3P28288 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
ABCD3P28288 RNA5SP72-201ENST00000364442 117 ntBASIC3.09□□□□□ -1.91
ABCD3P28288 SNORD14B-201ENST00000364533 90 ntBASIC3.09□□□□□ -1.91
ABCD3P28288 RNU6-715P-201ENST00000365204 103 ntBASIC3.09□□□□□ -1.91
ABCD3P28288 RNU6-45P-201ENST00000384471 107 ntBASIC3.09□□□□□ -1.91
ABCD3P28288 RPL17P50-201ENST00000396131 546 ntBASIC3.09□□□□□ -1.91
ABCD3P28288 RNU6-55P-201ENST00000411092 107 ntBASIC3.09□□□□□ -1.91
ABCD3P28288 RNU6-954P-201ENST00000411355 107 ntBASIC3.09□□□□□ -1.91
ABCD3P28288 AL356968.1-201ENST00000416622 474 ntBASIC3.09□□□□□ -1.91
ABCD3P28288 AL353621.1-201ENST00000418219 243 ntBASIC3.09□□□□□ -1.91
ABCD3P28288 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.09□□□□□ -1.91
ABCD3P28288 MTCYBP8-201ENST00000422855 651 ntBASIC3.09□□□□□ -1.91
ABCD3P28288 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
ABCD3P28288 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.09□□□□□ -1.91
ABCD3P28288 AC006946.1-201ENST00000429106 328 ntBASIC3.09□□□□□ -1.91
ABCD3P28288 AC000111.3-201ENST00000433478 193 ntBASIC3.09□□□□□ -1.91
ABCD3P28288 AL161651.1-201ENST00000440882 223 ntBASIC3.09□□□□□ -1.91
ABCD3P28288 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.09□□□□□ -1.91
ABCD3P28288 AC092185.1-201ENST00000491371 97 ntBASIC3.09□□□□□ -1.91
ABCD3P28288 AC079140.5-201ENST00000507882 310 ntBASIC3.09□□□□□ -1.91
ABCD3P28288 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.09□□□□□ -1.91
ABCD3P28288 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.09□□□□□ -1.91
ABCD3P28288 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.09□□□□□ -1.91
ABCD3P28288 RNU6-1178P-201ENST00000516674 107 ntBASIC3.09□□□□□ -1.91
ABCD3P28288 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.09□□□□□ -1.91
ABCD3P28288 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.09□□□□□ -1.91
ABCD3P28288 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.09□□□□□ -1.91
ABCD3P28288 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.09□□□□□ -1.91
ABCD3P28288 AC106782.4-201ENST00000568264 210 ntBASIC3.09□□□□□ -1.91
ABCD3P28288 MIR3941-201ENST00000582572 103 ntBASIC3.09□□□□□ -1.91
ABCD3P28288 BNIP3P30-201ENST00000601184 574 ntBASIC3.09□□□□□ -1.91
ABCD3P28288 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.09□□□□□ -1.91
ABCD3P28288 AC093788.1-201ENST00000609356 927 ntBASIC3.09□□□□□ -1.91
ABCD3P28288 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.09□□□□□ -1.91
ABCD3P28288 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.09□□□□□ -1.91
ABCD3P28288 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.09□□□□□ -1.91
ABCD3P28288 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
ABCD3P28288 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.08□□□□□ -1.92
ABCD3P28288 SNORA63.1-201ENST00000362493 131 ntBASIC3.08□□□□□ -1.92
ABCD3P28288 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ABCD3P28288 AP002088.1-201ENST00000382740 395 ntBASIC3.08□□□□□ -1.92
ABCD3P28288 RNU6-434P-201ENST00000384376 107 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms