Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DPA1P20036 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
HLA-DPA1P20036 AL136360.1-201ENST00000503377 1900 ntBASIC2.58□□□□□ -2
HLA-DPA1P20036 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DPA1P20036 MTCYBP36-201ENST00000404146 440 ntBASIC2.57□□□□□ -2
HLA-DPA1P20036 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DPA1P20036 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.57□□□□□ -2
HLA-DPA1P20036 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.57□□□□□ -2
HLA-DPA1P20036 RPS15AP9-201ENST00000439856 381 ntBASIC2.57□□□□□ -2
HLA-DPA1P20036 AL078601.1-201ENST00000444542 271 ntBASIC2.57□□□□□ -2
HLA-DPA1P20036 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DPA1P20036 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DPA1P20036 RPL36AP48-201ENST00000485521 314 ntBASIC2.57□□□□□ -2
HLA-DPA1P20036 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.57□□□□□ -2
HLA-DPA1P20036 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DPA1P20036 AC109927.2-201ENST00000506416 303 ntBASIC2.57□□□□□ -2
HLA-DPA1P20036 SNORA25.11-201ENST00000515935 105 ntBASIC2.57□□□□□ -2
HLA-DPA1P20036 RNU7-51P-201ENST00000516560 62 ntBASIC2.57□□□□□ -2
HLA-DPA1P20036 Y_RNA.689-201ENST00000516589 107 ntBASIC2.57□□□□□ -2
HLA-DPA1P20036 AC025881.1-201ENST00000518851 512 ntBASIC2.57□□□□□ -2
HLA-DPA1P20036 AP001372.4-201ENST00000524889 472 ntBASIC2.57□□□□□ -2
HLA-DPA1P20036 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.57□□□□□ -2
HLA-DPA1P20036 AC012435.1-202ENST00000568772 240 ntBASIC2.57□□□□□ -2
HLA-DPA1P20036 MIR3162-201ENST00000581818 82 ntBASIC2.57□□□□□ -2
HLA-DPA1P20036 AL645944.1-201ENST00000603857 493 ntBASIC2.57□□□□□ -2
HLA-DPA1P20036 AL359999.1-201ENST00000604513 294 ntBASIC2.57□□□□□ -2
HLA-DPA1P20036 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.57□□□□□ -2
HLA-DPA1P20036 AC104010.1-201ENST00000616889 150 ntBASIC2.57□□□□□ -2
HLA-DPA1P20036 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.57□□□□□ -2
HLA-DPA1P20036 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HLA-DPA1P20036 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.57□□□□□ -2
HLA-DPA1P20036 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.57□□□□□ -2
HLA-DPA1P20036 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.57□□□□□ -2
HLA-DPA1P20036 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.57□□□□□ -2
HLA-DPA1P20036 Z75746.1-201ENST00000440243 2080 ntBASIC2.56□□□□□ -2
HLA-DPA1P20036 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.56□□□□□ -2
HLA-DPA1P20036 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.56□□□□□ -2
HLA-DPA1P20036 Y_RNA.500-201ENST00000384466 111 ntBASIC2.56□□□□□ -2
HLA-DPA1P20036 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.56□□□□□ -2
HLA-DPA1P20036 SNORA40C-201ENST00000391285 128 ntBASIC2.56□□□□□ -2
HLA-DPA1P20036 UBE2V1P2-201ENST00000397758 440 ntBASIC2.56□□□□□ -2
HLA-DPA1P20036 RPS4XP8-201ENST00000402039 771 ntBASIC2.56□□□□□ -2
HLA-DPA1P20036 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.56□□□□□ -2
HLA-DPA1P20036 HIGD1AP15-201ENST00000416198 280 ntBASIC2.56□□□□□ -2
HLA-DPA1P20036 AC097463.2-201ENST00000421074 142 ntBASIC2.56□□□□□ -2
HLA-DPA1P20036 AC003685.2-201ENST00000422795 395 ntBASIC2.56□□□□□ -2
HLA-DPA1P20036 AL593851.1-201ENST00000426171 157 ntBASIC2.56□□□□□ -2
HLA-DPA1P20036 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DPA1P20036 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.56□□□□□ -2
HLA-DPA1P20036 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.56□□□□□ -2
HLA-DPA1P20036 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DPA1P20036 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DPA1P20036 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.56□□□□□ -2
HLA-DPA1P20036 SNORA31.15-201ENST00000516771 132 ntBASIC2.56□□□□□ -2
HLA-DPA1P20036 RNA5SP337-201ENST00000517007 109 ntBASIC2.56□□□□□ -2
HLA-DPA1P20036 AL157871.3-201ENST00000557231 293 ntBASIC2.56□□□□□ -2
HLA-DPA1P20036 AC012213.3-201ENST00000577199 777 ntBASIC2.56□□□□□ -2
HLA-DPA1P20036 MIR1273C-201ENST00000578669 77 ntBASIC2.56□□□□□ -2
HLA-DPA1P20036 MIR4672-201ENST00000583126 81 ntBASIC2.56□□□□□ -2
HLA-DPA1P20036 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.56□□□□□ -2
HLA-DPA1P20036 AC022022.2-201ENST00000602989 360 ntBASIC2.56□□□□□ -2
HLA-DPA1P20036 SNORD14A-201ENST00000606526 91 ntBASIC2.56□□□□□ -2
HLA-DPA1P20036 MIR15A-201ENST00000607334 83 ntBASIC2.56□□□□□ -2
HLA-DPA1P20036 AC024581.2-201ENST00000619986 252 ntBASIC2.56□□□□□ -2
HLA-DPA1P20036 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.56□□□□□ -2
HLA-DPA1P20036 FO624990.1-201ENST00000636373 85 ntBASIC2.56□□□□□ -2
HLA-DPA1P20036 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.56□□□□□ -2
HLA-DPA1P20036 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
HLA-DPA1P20036 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
HLA-DPA1P20036 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
HLA-DPA1P20036 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HLA-DPA1P20036 HSPE1P11-201ENST00000339579 310 ntBASIC2.55□□□□□ -2
HLA-DPA1P20036 Y_RNA.33-201ENST00000362591 102 ntBASIC2.55□□□□□ -2
HLA-DPA1P20036 RNU5F-7P-201ENST00000363696 115 ntBASIC2.55□□□□□ -2
HLA-DPA1P20036 RNU1-138P-201ENST00000384093 164 ntBASIC2.55□□□□□ -2
HLA-DPA1P20036 MIR27B-201ENST00000385129 97 ntBASIC2.55□□□□□ -2
HLA-DPA1P20036 MIR524-201ENST00000385242 87 ntBASIC2.55□□□□□ -2
HLA-DPA1P20036 MIR1302-8-201ENST00000408342 128 ntBASIC2.55□□□□□ -2
HLA-DPA1P20036 XKRYP1-201ENST00000423438 492 ntBASIC2.55□□□□□ -2
HLA-DPA1P20036 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.55□□□□□ -2
HLA-DPA1P20036 XKRYP2-201ENST00000432915 492 ntBASIC2.55□□□□□ -2
HLA-DPA1P20036 AC119618.1-201ENST00000434191 222 ntBASIC2.55□□□□□ -2
HLA-DPA1P20036 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.55□□□□□ -2
HLA-DPA1P20036 IFNA11P-201ENST00000446352 526 ntBASIC2.55□□□□□ -2
HLA-DPA1P20036 FABP5P13-201ENST00000452144 328 ntBASIC2.55□□□□□ -2
HLA-DPA1P20036 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DPA1P20036 KLF3P2-201ENST00000465138 268 ntBASIC2.55□□□□□ -2
HLA-DPA1P20036 AC011005.2-201ENST00000487324 359 ntBASIC2.55□□□□□ -2
HLA-DPA1P20036 RPS3AP22-201ENST00000488297 769 ntBASIC2.55□□□□□ -2
HLA-DPA1P20036 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DPA1P20036 AC007182.2-201ENST00000489251 402 ntBASIC2.55□□□□□ -2
HLA-DPA1P20036 FAM92A1P2-202ENST00000504766 877 ntBASIC2.55□□□□□ -2
HLA-DPA1P20036 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DPA1P20036 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.55□□□□□ -2
HLA-DPA1P20036 SMURF2P1-201ENST00000514992 481 ntBASIC2.55□□□□□ -2
HLA-DPA1P20036 CKS1BP7-201ENST00000522230 235 ntBASIC2.55□□□□□ -2
HLA-DPA1P20036 AL133241.1-201ENST00000556832 487 ntBASIC2.55□□□□□ -2
HLA-DPA1P20036 MIR5697-201ENST00000578045 78 ntBASIC2.55□□□□□ -2
HLA-DPA1P20036 RNU6-87P-201ENST00000607561 108 ntBASIC2.55□□□□□ -2
HLA-DPA1P20036 AC244517.12-201ENST00000623581 663 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms