| GLI3 | P10071 | MIR4666A-201 | ENST00000580160 | 79 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| GLI3 | P10071 | MIR4714-201 | ENST00000580728 | 77 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AL096840.1-201 | ENST00000603287 | 93 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC211469.2-201 | ENST00000605461 | 205 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC091946.2-201 | ENST00000606105 | 291 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AL627230.6-201 | ENST00000611129 | 280 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC025594.3-201 | ENST00000613068 | 790 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| GLI3 | P10071 | MIR7974-201 | ENST00000615835 | 79 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AL138955.1-201 | ENST00000622881 | 1040 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| GLI3 | P10071 | MIR7515-201 | ENST00000637837 | 67 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| GLI3 | P10071 | TRAJ22-201 | ENST00000390515 | 63 nt | APPRIS P1 BASIC | 1.49 | □□□□□ -2.17 | | |
| GLI3 | P10071 | NDUFB4P7-201 | ENST00000423198 | 363 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC007742.1-201 | ENST00000425789 | 329 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| GLI3 | P10071 | MTND2P5-201 | ENST00000432656 | 1006 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AL591212.2-201 | ENST00000433923 | 257 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| GLI3 | P10071 | ELOCP26-201 | ENST00000436067 | 329 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| GLI3 | P10071 | MTCO3P43-201 | ENST00000440974 | 771 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| GLI3 | P10071 | MRPL42P4-201 | ENST00000453267 | 443 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| GLI3 | P10071 | CEP70-205 | ENST00000464035 | 1054 nt | TSL 1 (best) BASIC | 1.49 | □□□□□ -2.17 | | |
| GLI3 | P10071 | RPL30P12-201 | ENST00000474666 | 353 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC104685.1-201 | ENST00000502445 | 371 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| GLI3 | P10071 | COL6A4P2-205 | ENST00000509855 | 506 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| GLI3 | P10071 | SNORA31.23-201 | ENST00000517219 | 133 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| GLI3 | P10071 | HSPA8P13-201 | ENST00000523715 | 472 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| GLI3 | P10071 | KLRF1-203 | ENST00000537723 | 598 nt | TSL 1 (best) BASIC | 1.49 | □□□□□ -2.17 | | |
| GLI3 | P10071 | LINC02286-201 | ENST00000552425 | 285 nt | TSL 2 BASIC | 1.49 | □□□□□ -2.17 | | |
| GLI3 | P10071 | LINC01584-203 | ENST00000567231 | 646 nt | TSL 5 BASIC | 1.49 | □□□□□ -2.17 | | |
| GLI3 | P10071 | MIR4789-201 | ENST00000577469 | 82 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC008749.1-201 | ENST00000597650 | 306 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AL161729.4-201 | ENST00000604650 | 476 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC003001.2-201 | ENST00000616294 | 831 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| GLI3 | P10071 | SCOC-201 | ENST00000338517 | 1864 nt | TSL 4 BASIC | 1.49 | □□□□□ -2.17 | | |
| GLI3 | P10071 | ZNF518A-210 | ENST00000624776 | 7994 nt | APPRIS P1 TSL 1 (best) BASIC | 1.48 | □□□□□ -2.17 | | |
| GLI3 | P10071 | ANKRD26P2-201 | ENST00000445530 | 1710 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| GLI3 | P10071 | RNU5A-1-201 | ENST00000362698 | 116 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| GLI3 | P10071 | RNU6-792P-201 | ENST00000363490 | 107 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AL513475.1-201 | ENST00000406602 | 315 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AL365184.1-201 | ENST00000413801 | 572 nt | TSL 3 BASIC | 1.48 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AL158840.1-201 | ENST00000414132 | 523 nt | TSL 3 BASIC | 1.48 | □□□□□ -2.17 | | |
| GLI3 | P10071 | CLYBL-AS1-201 | ENST00000416009 | 621 nt | TSL 3 BASIC | 1.48 | □□□□□ -2.17 | | |
| GLI3 | P10071 | TOPORSLP1-202 | ENST00000469756 | 969 nt | TSL 3 BASIC | 1.48 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC091860.1-201 | ENST00000505723 | 432 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC022447.3-201 | ENST00000506865 | 495 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC113420.1-201 | ENST00000507903 | 571 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC100768.1-201 | ENST00000525512 | 506 nt | TSL 3 BASIC | 1.48 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC010175.1-201 | ENST00000538219 | 224 nt | TSL 5 BASIC | 1.48 | □□□□□ -2.17 | | |
| GLI3 | P10071 | TIMM9-208 | ENST00000556007 | 746 nt | TSL 3 BASIC | 1.48 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC007598.1-202 | ENST00000561528 | 435 nt | TSL 3 BASIC | 1.48 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC126407.1-201 | ENST00000563044 | 566 nt | TSL 4 BASIC | 1.48 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC131274.4-201 | ENST00000577879 | 398 nt | TSL 3 BASIC | 1.48 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AL671309.1-201 | ENST00000603750 | 544 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC080013.4-201 | ENST00000607624 | 649 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| GLI3 | P10071 | DUXAP10-204 | ENST00000612052 | 616 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC021755.4-201 | ENST00000616620 | 456 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC097460.3-201 | ENST00000623099 | 442 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| GLI3 | P10071 | CCT4P2-201 | ENST00000233836 | 1548 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| GLI3 | P10071 | IGSF11-AS1-201 | ENST00000477009 | 1604 nt | TSL 2 BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | Y_RNA.68-201 | ENST00000362881 | 102 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | RNU6-839P-201 | ENST00000363347 | 108 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | SUGT1P1-201 | ENST00000379514 | 476 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | RNU6-1300P-201 | ENST00000391046 | 108 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | SPINK13-201 | ENST00000398450 | 509 nt | APPRIS P2 TSL 1 (best) BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | C1GALT1-202 | ENST00000402468 | 930 nt | TSL 1 (best) BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | USP9YP19-201 | ENST00000412165 | 485 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC005104.1-201 | ENST00000414896 | 442 nt | TSL 3 BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | USP9YP13-201 | ENST00000417797 | 480 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC098614.2-201 | ENST00000426040 | 255 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | RAC1P8-201 | ENST00000427086 | 527 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | ABCC13-201 | ENST00000429114 | 611 nt | TSL 3 BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AL591704.1-201 | ENST00000432574 | 275 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AL049734.2-201 | ENST00000441066 | 616 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | COX6CP18-201 | ENST00000448769 | 222 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC011998.3-201 | ENST00000457053 | 254 nt | TSL 3 BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | LINC01036-201 | ENST00000458683 | 858 nt | TSL 3 BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC008379.1-201 | ENST00000463655 | 464 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | HESX1-202 | ENST00000473921 | 757 nt | TSL 5 BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | MRPS36P2-201 | ENST00000512569 | 299 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | PIH1D2-206 | ENST00000528775 | 1025 nt | TSL 5 BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC004217.2-201 | ENST00000547401 | 751 nt | TSL 3 BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AL133372.3-201 | ENST00000553082 | 821 nt | TSL 3 BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC004943.1-202 | ENST00000558618 | 503 nt | TSL 3 BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | LINC02253-201 | ENST00000559321 | 448 nt | TSL 2 BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC090888.1-201 | ENST00000561335 | 1141 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC098850.3-201 | ENST00000577569 | 771 nt | TSL 3 BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | MIR5571-201 | ENST00000577998 | 113 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | SNORD14A-201 | ENST00000606526 | 91 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | RNU6-217P-201 | ENST00000384164 | 104 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AL590705.2-201 | ENST00000420204 | 281 nt | TSL 5 BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | EIF4EP4-201 | ENST00000424916 | 578 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | FAR2P3-204 | ENST00000434661 | 444 nt | TSL 2 BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | OSTCP8-201 | ENST00000445117 | 448 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC010789.1-201 | ENST00000458489 | 291 nt | TSL 5 BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | MRPS17P3-201 | ENST00000465453 | 385 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC034223.1-201 | ENST00000511054 | 599 nt | TSL 3 BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | DEFB130C-201 | ENST00000528518 | 237 nt | TSL 1 (best) BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | TSPAN19-204 | ENST00000532498 | 998 nt | APPRIS P1 TSL 5 BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC124947.2-202 | ENST00000552735 | 133 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC044798.1-201 | ENST00000565146 | 418 nt | TSL 5 BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC090897.2-201 | ENST00000581715 | 130 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| GLI3 | P10071 | AC105245.1-201 | ENST00000581934 | 244 nt | BASIC | 1.47 | □□□□□ -2.17 | | |