Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 KC877982.1-201ENST00000602313 470 ntBASIC1.99□□□□□ -2.09
MRPL3P09001 AC008498.1-201ENST00000613012 531 ntBASIC1.99□□□□□ -2.09
MRPL3P09001 AC025594.3-201ENST00000613068 790 ntBASIC1.99□□□□□ -2.09
MRPL3P09001 AC011890.2-201ENST00000613393 294 ntBASIC1.99□□□□□ -2.09
MRPL3P09001 uc_338.12-201ENST00000616344 181 ntBASIC1.99□□□□□ -2.09
MRPL3P09001 Z69908.1-201ENST00000622603 247 ntBASIC1.99□□□□□ -2.09
MRPL3P09001 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
MRPL3P09001 AC025048.6-202ENST00000627667 438 ntBASIC1.99□□□□□ -2.09
MRPL3P09001 AC010149.2-201ENST00000637608 315 ntBASIC1.99□□□□□ -2.09
MRPL3P09001 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MRPL3P09001 AC092104.1-201ENST00000497346 1441 ntBASIC1.99□□□□□ -2.09
MRPL3P09001 ELL2P3-201ENST00000457883 1602 ntBASIC1.99□□□□□ -2.09
MRPL3P09001 AC080128.1-201ENST00000474389 1917 ntBASIC1.98□□□□□ -2.09
MRPL3P09001 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.98□□□□□ -2.09
MRPL3P09001 SNORA80A-201ENST00000363922 136 ntBASIC1.98□□□□□ -2.09
MRPL3P09001 RN7SKP226-201ENST00000364912 300 ntBASIC1.98□□□□□ -2.09
MRPL3P09001 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
MRPL3P09001 MIR144-201ENST00000384886 86 ntBASIC1.98□□□□□ -2.09
MRPL3P09001 RNU2-36P-201ENST00000410361 191 ntBASIC1.98□□□□□ -2.09
MRPL3P09001 RNU6-1328P-201ENST00000410938 106 ntBASIC1.98□□□□□ -2.09
MRPL3P09001 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.98□□□□□ -2.09
MRPL3P09001 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.98□□□□□ -2.09
MRPL3P09001 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.98□□□□□ -2.09
MRPL3P09001 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.98□□□□□ -2.09
MRPL3P09001 AC093106.2-201ENST00000428212 385 ntBASIC1.98□□□□□ -2.09
MRPL3P09001 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.98□□□□□ -2.09
MRPL3P09001 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.98□□□□□ -2.09
MRPL3P09001 RPS15AP5-201ENST00000436276 388 ntBASIC1.98□□□□□ -2.09
MRPL3P09001 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.98□□□□□ -2.09
MRPL3P09001 MTND6P13-201ENST00000443510 523 ntBASIC1.98□□□□□ -2.09
MRPL3P09001 CBWD4P-201ENST00000445695 655 ntBASIC1.98□□□□□ -2.09
MRPL3P09001 MTATP6P26-201ENST00000445926 662 ntBASIC1.98□□□□□ -2.09
MRPL3P09001 IFNA11P-201ENST00000446352 526 ntBASIC1.98□□□□□ -2.09
MRPL3P09001 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.98□□□□□ -2.09
MRPL3P09001 AC020550.1-201ENST00000447385 163 ntBASIC1.98□□□□□ -2.09
MRPL3P09001 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.98□□□□□ -2.09
MRPL3P09001 RPL12P25-201ENST00000455592 494 ntBASIC1.98□□□□□ -2.09
MRPL3P09001 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.98□□□□□ -2.09
MRPL3P09001 MTND1P3-201ENST00000484956 952 ntBASIC1.98□□□□□ -2.09
MRPL3P09001 SLC25A15P5-201ENST00000508033 253 ntBASIC1.98□□□□□ -2.09
MRPL3P09001 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.98□□□□□ -2.09
MRPL3P09001 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.98□□□□□ -2.09
MRPL3P09001 RPL21P5-201ENST00000554662 472 ntBASIC1.98□□□□□ -2.09
MRPL3P09001 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.98□□□□□ -2.09
MRPL3P09001 MYL12BP1-201ENST00000569826 507 ntBASIC1.98□□□□□ -2.09
MRPL3P09001 MIR5007-201ENST00000583098 95 ntBASIC1.98□□□□□ -2.09
MRPL3P09001 AL590229.1-201ENST00000603497 542 ntBASIC1.98□□□□□ -2.09
MRPL3P09001 AL358072.1-201ENST00000604156 575 ntBASIC1.98□□□□□ -2.09
MRPL3P09001 AC005000.2-201ENST00000605468 310 ntBASIC1.98□□□□□ -2.09
MRPL3P09001 AL451064.1-201ENST00000607718 471 ntBASIC1.98□□□□□ -2.09
MRPL3P09001 AC006338.1-201ENST00000618453 749 ntBASIC1.98□□□□□ -2.09
MRPL3P09001 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
MRPL3P09001 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
MRPL3P09001 Z82209.1-201ENST00000422141 2135 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.97□□□□□ -2.09
MRPL3P09001 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
MRPL3P09001 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC1.97□□□□□ -2.09
MRPL3P09001 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
MRPL3P09001 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.97□□□□□ -2.09
MRPL3P09001 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
MRPL3P09001 FGF7P2-201ENST00000332473 296 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 RNU5E-1-201ENST00000362477 120 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 U8.3-201ENST00000363321 132 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.97□□□□□ -2.09
MRPL3P09001 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.97□□□□□ -2.09
MRPL3P09001 SNORA67.4-201ENST00000384688 142 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 RNY3P10-201ENST00000384764 102 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 MIR221-201ENST00000385135 110 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.97□□□□□ -2.09
MRPL3P09001 FCF1P10-201ENST00000407590 479 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 Y_RNA.598-201ENST00000410480 95 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 RNU6-248P-201ENST00000410720 107 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 RN7SKP142-201ENST00000411236 328 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 AL513331.1-201ENST00000411908 397 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 HMGN1P14-201ENST00000412459 517 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 AC009963.1-201ENST00000417265 157 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.97□□□□□ -2.09
MRPL3P09001 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.97□□□□□ -2.09
MRPL3P09001 USP12PX-201ENST00000432383 1057 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 AC010153.1-201ENST00000432862 727 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.97□□□□□ -2.09
MRPL3P09001 USP9YP29-201ENST00000445112 563 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 AL031659.1-201ENST00000447075 539 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 SSXP1-201ENST00000453640 473 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.97□□□□□ -2.09
MRPL3P09001 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.97□□□□□ -2.09
MRPL3P09001 AL121769.1-201ENST00000469473 401 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 AC091965.2-201ENST00000512324 613 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
MRPL3P09001 RNU4-29P-201ENST00000515943 174 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 RNU6-390P-201ENST00000516259 103 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 RNU6-1220P-201ENST00000517126 108 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 HMGN1P28-201ENST00000521340 364 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.97□□□□□ -2.09
MRPL3P09001 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.97□□□□□ -2.09
MRPL3P09001 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.97□□□□□ -2.09
MRPL3P09001 AC119751.7-201ENST00000600494 245 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 AC068276.1-201ENST00000605793 379 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 SNORD14A-201ENST00000606526 91 ntBASIC1.97□□□□□ -2.09
MRPL3P09001 RNU6-87P-201ENST00000607561 108 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms