Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AP002001.1-203ENST00000534002 267 ntBASIC4.7□□□□□ -1.66
THBS1P07996 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.7□□□□□ -1.66
THBS1P07996 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.7□□□□□ -1.66
THBS1P07996 AC233702.9-201ENST00000581528 203 ntBASIC4.7□□□□□ -1.66
THBS1P07996 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.7□□□□□ -1.66
THBS1P07996 AC024940.4-201ENST00000605507 246 ntBASIC4.7□□□□□ -1.66
THBS1P07996 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.7□□□□□ -1.66
THBS1P07996 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.7□□□□□ -1.66
THBS1P07996 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
THBS1P07996 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
THBS1P07996 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
THBS1P07996 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
THBS1P07996 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
THBS1P07996 AL365440.1-201ENST00000436135 2167 ntBASIC4.7□□□□□ -1.66
THBS1P07996 SMG1P6-201ENST00000532337 2930 ntBASIC4.69□□□□□ -1.66
THBS1P07996 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
THBS1P07996 SCARNA15-201ENST00000607520 4325 ntBASIC4.69□□□□□ -1.66
THBS1P07996 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.69□□□□□ -1.66
THBS1P07996 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
THBS1P07996 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
THBS1P07996 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
THBS1P07996 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
THBS1P07996 SNORA17.1-201ENST00000362945 126 ntBASIC4.69□□□□□ -1.66
THBS1P07996 RNU6-72P-201ENST00000384285 79 ntBASIC4.69□□□□□ -1.66
THBS1P07996 MTHFD2P2-201ENST00000407725 247 ntBASIC4.69□□□□□ -1.66
THBS1P07996 RN7SKP213-201ENST00000410746 298 ntBASIC4.69□□□□□ -1.66
THBS1P07996 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.69□□□□□ -1.66
THBS1P07996 MTND4LP9-201ENST00000427694 174 ntBASIC4.69□□□□□ -1.66
THBS1P07996 PSMD10P3-201ENST00000437000 448 ntBASIC4.69□□□□□ -1.66
THBS1P07996 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.69□□□□□ -1.66
THBS1P07996 AC009237.7-201ENST00000447357 229 ntBASIC4.69□□□□□ -1.66
THBS1P07996 PTMAP3-201ENST00000447474 330 ntBASIC4.69□□□□□ -1.66
THBS1P07996 RPL23AP3-201ENST00000453844 468 ntBASIC4.69□□□□□ -1.66
THBS1P07996 AL132838.2-201ENST00000492041 314 ntBASIC4.69□□□□□ -1.66
THBS1P07996 AF186996.7-201ENST00000492781 209 ntBASIC4.69□□□□□ -1.66
THBS1P07996 RN7SL808P-201ENST00000496066 299 ntBASIC4.69□□□□□ -1.66
THBS1P07996 RNA5SP291-201ENST00000517222 105 ntBASIC4.69□□□□□ -1.66
THBS1P07996 RPL23AP53-201ENST00000521854 457 ntBASIC4.69□□□□□ -1.66
THBS1P07996 AC112693.2-201ENST00000556538 232 ntBASIC4.69□□□□□ -1.66
THBS1P07996 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.69□□□□□ -1.66
THBS1P07996 AC105254.2-201ENST00000603636 436 ntBASIC4.69□□□□□ -1.66
THBS1P07996 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
THBS1P07996 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
THBS1P07996 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
THBS1P07996 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
THBS1P07996 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
THBS1P07996 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.69□□□□□ -1.66
THBS1P07996 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
THBS1P07996 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
THBS1P07996 AC063976.2-201ENST00000425667 3556 ntBASIC4.69□□□□□ -1.66
THBS1P07996 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
THBS1P07996 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
THBS1P07996 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
THBS1P07996 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.68□□□□□ -1.66
THBS1P07996 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
THBS1P07996 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.68□□□□□ -1.66
THBS1P07996 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
THBS1P07996 RNU6-1272P-201ENST00000362776 107 ntBASIC4.68□□□□□ -1.66
THBS1P07996 MIR1290-201ENST00000408735 78 ntBASIC4.68□□□□□ -1.66
THBS1P07996 Y_RNA.595-201ENST00000410403 105 ntBASIC4.68□□□□□ -1.66
THBS1P07996 CKS1BP5-201ENST00000434172 273 ntBASIC4.68□□□□□ -1.66
THBS1P07996 RPL23AP58-201ENST00000440453 469 ntBASIC4.68□□□□□ -1.66
THBS1P07996 RPS20P10-201ENST00000451209 253 ntBASIC4.68□□□□□ -1.66
THBS1P07996 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.68□□□□□ -1.66
THBS1P07996 SNRPCP2-201ENST00000504370 475 ntBASIC4.68□□□□□ -1.66
THBS1P07996 AC097462.2-201ENST00000504623 481 ntBASIC4.68□□□□□ -1.66
THBS1P07996 RN7SKP122-201ENST00000515923 296 ntBASIC4.68□□□□□ -1.66
THBS1P07996 Y_RNA.797-201ENST00000515977 94 ntBASIC4.68□□□□□ -1.66
THBS1P07996 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.68□□□□□ -1.66
THBS1P07996 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.68□□□□□ -1.66
THBS1P07996 AC126915.2-201ENST00000610957 190 ntBASIC4.68□□□□□ -1.66
THBS1P07996 TUG1_4.1-201ENST00000619464 181 ntBASIC4.68□□□□□ -1.66
THBS1P07996 AC241585.2-209ENST00000638217 143 ntBASIC4.68□□□□□ -1.66
THBS1P07996 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
THBS1P07996 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
THBS1P07996 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
THBS1P07996 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
THBS1P07996 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
THBS1P07996 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
THBS1P07996 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
THBS1P07996 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
THBS1P07996 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.67□□□□□ -1.66
THBS1P07996 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
THBS1P07996 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
THBS1P07996 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
THBS1P07996 AC110491.1-201ENST00000562191 2010 ntBASIC4.67□□□□□ -1.66
THBS1P07996 RNA5SP443-201ENST00000363083 132 ntBASIC4.67□□□□□ -1.66
THBS1P07996 RN7SKP224-201ENST00000364140 325 ntBASIC4.67□□□□□ -1.66
THBS1P07996 RNU6-356P-201ENST00000384140 107 ntBASIC4.67□□□□□ -1.66
THBS1P07996 HLFP1-201ENST00000402375 499 ntBASIC4.67□□□□□ -1.66
THBS1P07996 CTSL3P-202ENST00000412179 788 ntBASIC4.67□□□□□ -1.66
THBS1P07996 AC098614.2-201ENST00000426040 255 ntBASIC4.67□□□□□ -1.66
THBS1P07996 AC091390.3-201ENST00000426478 338 ntBASIC4.67□□□□□ -1.66
THBS1P07996 BTF3P11-201ENST00000426582 477 ntBASIC4.67□□□□□ -1.66
THBS1P07996 RPS29P9-201ENST00000440360 171 ntBASIC4.67□□□□□ -1.66
THBS1P07996 AL389915.2-201ENST00000454576 441 ntBASIC4.67□□□□□ -1.66
THBS1P07996 RPL7AP6-201ENST00000477943 801 ntBASIC4.67□□□□□ -1.66
THBS1P07996 RPSAP50-201ENST00000481955 852 ntBASIC4.67□□□□□ -1.66
THBS1P07996 RPS23P1-201ENST00000491662 432 ntBASIC4.67□□□□□ -1.66
THBS1P07996 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms