Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 MIR5697-201ENST00000578045 78 ntBASIC1.95□□□□□ -2.1
HLA-DPB1P04440 MIR5694-201ENST00000581190 76 ntBASIC1.95□□□□□ -2.1
HLA-DPB1P04440 MIR3117-201ENST00000584034 78 ntBASIC1.95□□□□□ -2.1
HLA-DPB1P04440 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.95□□□□□ -2.1
HLA-DPB1P04440 MTCYBP22-201ENST00000603788 447 ntBASIC1.95□□□□□ -2.1
HLA-DPB1P04440 AC025594.3-201ENST00000613068 790 ntBASIC1.95□□□□□ -2.1
HLA-DPB1P04440 AC140725.3-201ENST00000616193 880 ntBASIC1.95□□□□□ -2.1
HLA-DPB1P04440 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DPB1P04440 AL589994.2-201ENST00000621124 579 ntBASIC1.95□□□□□ -2.1
HLA-DPB1P04440 AP002791.1-201ENST00000623291 381 ntBASIC1.95□□□□□ -2.1
HLA-DPB1P04440 AC093591.3-201ENST00000634516 308 ntBASIC1.95□□□□□ -2.1
HLA-DPB1P04440 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
HLA-DPB1P04440 AC135776.4-201ENST00000624300 1904 ntBASIC1.95□□□□□ -2.1
HLA-DPB1P04440 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HLA-DPB1P04440 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DPB1P04440 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
HLA-DPB1P04440 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.94□□□□□ -2.1
HLA-DPB1P04440 AC092104.1-201ENST00000497346 1441 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
HLA-DPB1P04440 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HLA-DPB1P04440 RNU6-501P-201ENST00000364072 100 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 RNA5SP138-201ENST00000365098 114 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 RNU4-52P-201ENST00000384209 138 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 RNU6-1072P-201ENST00000384703 107 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 RNU6-443P-201ENST00000384780 107 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 HMGB1P27-201ENST00000431429 603 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 AC018634.1-201ENST00000437554 401 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 MTCYBP39-201ENST00000437562 491 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 RPL22P17-201ENST00000438729 315 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 HMGN2P10-201ENST00000448085 265 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 SSXP1-201ENST00000453640 473 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 TRBV1-201ENST00000476502 284 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 MTND1P3-201ENST00000484956 952 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 AC079804.2-201ENST00000490376 200 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 AC008413.1-201ENST00000511864 177 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 RNU5F-8P-201ENST00000515941 111 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 SNORA3.4-201ENST00000515969 96 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 RN7SKP287-201ENST00000516546 266 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 RNU6-703P-201ENST00000516946 107 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 AC025755.1-201ENST00000521306 278 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.94□□□□□ -2.1
HLA-DPB1P04440 AP003181.2-201ENST00000528941 181 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.94□□□□□ -2.1
HLA-DPB1P04440 AC006199.1-201ENST00000548728 219 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 ZNF321P-202ENST00000550843 495 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DPB1P04440 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DPB1P04440 AC002400.1-201ENST00000569310 726 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 SNORD53-201ENST00000579969 78 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.94□□□□□ -2.1
HLA-DPB1P04440 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 AC093424.1-201ENST00000604999 338 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 AL355816.2-201ENST00000610049 647 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 AC004223.4-201ENST00000612426 332 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DPB1P04440 AC010149.2-201ENST00000637608 315 ntBASIC1.94□□□□□ -2.1
HLA-DPB1P04440 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
HLA-DPB1P04440 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
HLA-DPB1P04440 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
HLA-DPB1P04440 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HLA-DPB1P04440 AC080128.1-201ENST00000474389 1917 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 AC004520.1-201ENST00000608362 1413 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
HLA-DPB1P04440 NACAP2-201ENST00000318548 624 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 RNU1-91P-201ENST00000364746 163 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
HLA-DPB1P04440 Z98749.2-208ENST00000381646 500 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 RNU4-53P-201ENST00000410828 140 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DPB1P04440 AC092809.3-201ENST00000415453 231 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 AC096649.2-201ENST00000416186 393 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 RPS15AP12-201ENST00000419498 388 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 MTCO3P30-201ENST00000426425 670 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DPB1P04440 HMGB1P9-201ENST00000429856 646 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 MYL8P-204ENST00000431574 518 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 AL512286.1-201ENST00000439244 400 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 MTND4P25-201ENST00000441039 533 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.93□□□□□ -2.1
HLA-DPB1P04440 RPL23AP7-203ENST00000449021 469 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 AL590365.1-201ENST00000450788 243 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 RPL23AP49-201ENST00000492925 468 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 MTCYBP35-201ENST00000503630 1137 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DPB1P04440 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DPB1P04440 SCARNA11.3-201ENST00000517276 130 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.93□□□□□ -2.1
HLA-DPB1P04440 AC009902.1-201ENST00000519351 183 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 BTF3P12-201ENST00000519620 469 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DPB1P04440 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DPB1P04440 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DPB1P04440 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.93□□□□□ -2.1
HLA-DPB1P04440 AC021739.1-201ENST00000559631 174 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 PCMTD1P2-201ENST00000565017 355 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 MTATP6P24-201ENST00000576835 677 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DPB1P04440 LRRC37A5P-203ENST00000580181 585 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DPB1P04440 MIR5002-201ENST00000584713 97 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms