Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 MIR517C-201ENST00000385103 95 ntBASIC1.61□□□□□ -2.15
APOEP02649 SNORA67.6-201ENST00000391093 99 ntBASIC1.61□□□□□ -2.15
APOEP02649 RPL22P22-201ENST00000395439 379 ntBASIC1.61□□□□□ -2.15
APOEP02649 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.61□□□□□ -2.15
APOEP02649 NDUFS5P1-201ENST00000405668 289 ntBASIC1.61□□□□□ -2.15
APOEP02649 OR9R1P-201ENST00000412200 877 ntBASIC1.61□□□□□ -2.15
APOEP02649 BTF3P8-201ENST00000414577 526 ntBASIC1.61□□□□□ -2.15
APOEP02649 AC007435.1-201ENST00000421086 415 ntBASIC1.61□□□□□ -2.15
APOEP02649 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.61□□□□□ -2.15
APOEP02649 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.61□□□□□ -2.15
APOEP02649 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC1.61□□□□□ -2.15
APOEP02649 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.61□□□□□ -2.15
APOEP02649 RNU1-98P-201ENST00000458992 160 ntBASIC1.61□□□□□ -2.15
APOEP02649 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.61□□□□□ -2.15
APOEP02649 CKS1BP2-201ENST00000497342 240 ntBASIC1.61□□□□□ -2.15
APOEP02649 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
APOEP02649 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.61□□□□□ -2.15
APOEP02649 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
APOEP02649 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
APOEP02649 uc_338.5-201ENST00000611839 155 ntBASIC1.61□□□□□ -2.15
APOEP02649 AC008759.3-201ENST00000613300 508 ntBASIC1.61□□□□□ -2.15
APOEP02649 TUG1_2.1-201ENST00000614234 87 ntBASIC1.61□□□□□ -2.15
APOEP02649 AP000648.3-201ENST00000623539 4507 ntBASIC1.6□□□□□ -2.15
APOEP02649 RNU6-354P-201ENST00000383862 107 ntBASIC1.6□□□□□ -2.15
APOEP02649 RNU6-610P-201ENST00000384264 107 ntBASIC1.6□□□□□ -2.15
APOEP02649 RNU6-1207P-201ENST00000384343 107 ntBASIC1.6□□□□□ -2.15
APOEP02649 RNU6-952P-201ENST00000391164 108 ntBASIC1.6□□□□□ -2.15
APOEP02649 RNU6-754P-201ENST00000391166 107 ntBASIC1.6□□□□□ -2.15
APOEP02649 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.6□□□□□ -2.15
APOEP02649 AL158823.1-201ENST00000418441 478 ntBASIC1.6□□□□□ -2.15
APOEP02649 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.6□□□□□ -2.15
APOEP02649 AL160275.3-201ENST00000423876 471 ntBASIC1.6□□□□□ -2.15
APOEP02649 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.6□□□□□ -2.15
APOEP02649 HMGB1P27-201ENST00000431429 603 ntBASIC1.6□□□□□ -2.15
APOEP02649 NANOGP2-201ENST00000435391 727 ntBASIC1.6□□□□□ -2.15
APOEP02649 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.6□□□□□ -2.15
APOEP02649 COX7BP2-201ENST00000437976 242 ntBASIC1.6□□□□□ -2.15
APOEP02649 MTND6P13-201ENST00000443510 523 ntBASIC1.6□□□□□ -2.15
APOEP02649 AMD1P1-201ENST00000457220 922 ntBASIC1.6□□□□□ -2.15
APOEP02649 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.6□□□□□ -2.15
APOEP02649 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
APOEP02649 RNU6-237P-201ENST00000515985 71 ntBASIC1.6□□□□□ -2.15
APOEP02649 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.6□□□□□ -2.15
APOEP02649 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.6□□□□□ -2.15
APOEP02649 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
APOEP02649 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.6□□□□□ -2.15
APOEP02649 AF038458.1-201ENST00000588406 262 ntBASIC1.6□□□□□ -2.15
APOEP02649 AC073544.2-201ENST00000601155 540 ntBASIC1.6□□□□□ -2.15
APOEP02649 AC098483.2-201ENST00000603158 454 ntBASIC1.6□□□□□ -2.15
APOEP02649 AL078605.1-201ENST00000603529 500 ntBASIC1.6□□□□□ -2.15
APOEP02649 AL445435.1-201ENST00000604232 665 ntBASIC1.6□□□□□ -2.15
APOEP02649 AC009974.1-201ENST00000608881 455 ntBASIC1.6□□□□□ -2.15
APOEP02649 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.6□□□□□ -2.15
APOEP02649 MIR5739-201ENST00000619803 80 ntBASIC1.6□□□□□ -2.15
APOEP02649 Z99571.1-201ENST00000636677 394 ntBASIC1.6□□□□□ -2.15
APOEP02649 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
APOEP02649 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
APOEP02649 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
APOEP02649 RNU6-97P-201ENST00000363387 104 ntBASIC1.59□□□□□ -2.15
APOEP02649 RNU6-457P-201ENST00000363999 107 ntBASIC1.59□□□□□ -2.15
APOEP02649 RNU6-359P-201ENST00000365466 108 ntBASIC1.59□□□□□ -2.15
APOEP02649 RNU6-658P-201ENST00000384606 106 ntBASIC1.59□□□□□ -2.15
APOEP02649 MIR518A2-201ENST00000384966 87 ntBASIC1.59□□□□□ -2.15
APOEP02649 AC068050.1-201ENST00000394891 380 ntBASIC1.59□□□□□ -2.15
APOEP02649 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
APOEP02649 AL021407.1-201ENST00000404531 386 ntBASIC1.59□□□□□ -2.15
APOEP02649 RNU2-68P-201ENST00000410878 191 ntBASIC1.59□□□□□ -2.15
APOEP02649 VN1R36P-201ENST00000414936 291 ntBASIC1.59□□□□□ -2.15
APOEP02649 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.59□□□□□ -2.15
APOEP02649 PTGES3P4-201ENST00000426243 356 ntBASIC1.59□□□□□ -2.15
APOEP02649 AC079776.3-201ENST00000450665 370 ntBASIC1.59□□□□□ -2.15
APOEP02649 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.59□□□□□ -2.15
APOEP02649 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.59□□□□□ -2.15
APOEP02649 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.59□□□□□ -2.15
APOEP02649 BNIP3P23-201ENST00000599655 511 ntBASIC1.59□□□□□ -2.15
APOEP02649 AL445264.1-201ENST00000621719 171 ntBASIC1.59□□□□□ -2.15
APOEP02649 AC009268.2-201ENST00000621925 457 ntBASIC1.59□□□□□ -2.15
APOEP02649 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.59□□□□□ -2.15
APOEP02649 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
APOEP02649 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.58□□□□□ -2.16
APOEP02649 CISD1P1-201ENST00000393907 327 ntBASIC1.58□□□□□ -2.16
APOEP02649 RN7SKP51-201ENST00000410781 304 ntBASIC1.58□□□□□ -2.16
APOEP02649 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.58□□□□□ -2.16
APOEP02649 UBE2FP1-201ENST00000416536 447 ntBASIC1.58□□□□□ -2.16
APOEP02649 AC097463.2-201ENST00000421074 142 ntBASIC1.58□□□□□ -2.16
APOEP02649 AC244636.1-201ENST00000421152 228 ntBASIC1.58□□□□□ -2.16
APOEP02649 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.58□□□□□ -2.16
APOEP02649 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.58□□□□□ -2.16
APOEP02649 RPL23AP76-201ENST00000441860 458 ntBASIC1.58□□□□□ -2.16
APOEP02649 MTATP6P30-201ENST00000443540 664 ntBASIC1.58□□□□□ -2.16
APOEP02649 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.58□□□□□ -2.16
APOEP02649 RNU7-136P-201ENST00000458819 69 ntBASIC1.58□□□□□ -2.16
APOEP02649 RPL36AP48-201ENST00000485521 314 ntBASIC1.58□□□□□ -2.16
APOEP02649 HMGB1P28-201ENST00000507778 552 ntBASIC1.58□□□□□ -2.16
APOEP02649 AC117532.1-201ENST00000514638 323 ntBASIC1.58□□□□□ -2.16
APOEP02649 RNU6-581P-201ENST00000516214 105 ntBASIC1.58□□□□□ -2.16
APOEP02649 SNORA31.24-201ENST00000517232 57 ntBASIC1.58□□□□□ -2.16
APOEP02649 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.58□□□□□ -2.16
APOEP02649 GNAI2P1-201ENST00000541815 315 ntBASIC1.58□□□□□ -2.16
APOEP02649 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms