Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 MRPL42P6-201ENST00000486397 371 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.79□□□□□ -2.12
HLA-DQA1P01909 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.79□□□□□ -2.12
HLA-DQA1P01909 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.79□□□□□ -2.12
HLA-DQA1P01909 MRPS33P3-201ENST00000513456 322 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.79□□□□□ -2.12
HLA-DQA1P01909 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
HLA-DQA1P01909 Y_RNA.689-201ENST00000516589 107 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 RNU6-143P-201ENST00000516942 93 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 RNU6-1183P-201ENST00000517054 60 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AC025755.1-201ENST00000521306 278 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AP003122.3-201ENST00000526316 255 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AC084851.1-201ENST00000529105 249 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AP000889.2-201ENST00000532684 490 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AC243972.3-201ENST00000539655 198 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 LRRC34P1-201ENST00000542742 915 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AC121758.2-201ENST00000553271 193 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AL121821.2-201ENST00000556081 394 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AC106782.4-201ENST00000568264 210 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 MIR3167-201ENST00000579623 85 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.79□□□□□ -2.12
HLA-DQA1P01909 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AL356280.1-201ENST00000603614 379 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AC091152.3-201ENST00000604227 325 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AC007938.3-201ENST00000604965 623 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 RNU6-87P-201ENST00000607561 108 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AC022893.3-201ENST00000607665 437 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AC067747.1-201ENST00000608026 250 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AC138749.5-201ENST00000611461 208 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AC011939.3-201ENST00000613686 466 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AC116165.2-201ENST00000616705 206 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AC079248.2-201ENST00000623779 326 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AL512643.1-201ENST00000635735 524 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.79□□□□□ -2.12
HLA-DQA1P01909 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
HLA-DQA1P01909 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.79□□□□□ -2.12
HLA-DQA1P01909 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
HLA-DQA1P01909 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
HLA-DQA1P01909 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.78□□□□□ -2.12
HLA-DQA1P01909 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 RNU6-525P-201ENST00000363685 104 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 RNU6-553P-201ENST00000364047 96 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 RNU1-112P-201ENST00000364401 164 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 HMGB3P2-201ENST00000411913 584 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.78□□□□□ -2.12
HLA-DQA1P01909 AC005005.2-201ENST00000420779 380 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 AL109913.1-201ENST00000421173 514 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 AC006366.1-201ENST00000422002 759 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DQA1P01909 AL591212.2-201ENST00000433923 257 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 UBE2D3P4-201ENST00000441973 436 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HLA-DQA1P01909 USP9YP12-201ENST00000450481 570 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 AL133217.1-201ENST00000450980 425 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DQA1P01909 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DQA1P01909 MTND1P12-201ENST00000455231 147 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DQA1P01909 RPL30P6-201ENST00000475925 342 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 AC004263.1-201ENST00000479327 332 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 GZMAP1-201ENST00000503054 631 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 AC022447.1-201ENST00000515358 464 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 RNU6-914P-201ENST00000516749 109 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DQA1P01909 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DQA1P01909 OR5B19P-201ENST00000531766 928 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 AC079600.2-201ENST00000550076 130 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 GTF3AP2-201ENST00000557014 266 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DQA1P01909 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.78□□□□□ -2.12
HLA-DQA1P01909 AC109446.2-201ENST00000567872 497 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DQA1P01909 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DQA1P01909 MIR548AB-201ENST00000584917 84 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 AC008121.1-201ENST00000603244 268 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 AL355598.1-201ENST00000604169 202 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 ATP1B3P1-201ENST00000605365 821 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 Z99289.3-201ENST00000605586 594 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 AL360219.1-201ENST00000610230 366 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 AC122133.1-201ENST00000613964 233 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 FRG1KP-201ENST00000623592 341 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 AC099654.13-201ENST00000639774 207 ntBASIC1.78□□□□□ -2.12
HLA-DQA1P01909 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
HLA-DQA1P01909 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
HLA-DQA1P01909 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
HLA-DQA1P01909 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
HLA-DQA1P01909 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.77□□□□□ -2.13
HLA-DQA1P01909 OR56A5-201ENST00000340110 738 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 RNU5E-1-201ENST00000362477 120 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 SNORD56.2-201ENST00000363242 71 ntBASIC1.77□□□□□ -2.13
HLA-DQA1P01909 SNORA5B-201ENST00000363786 132 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms