Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 SNORA29-201ENST00000384183 140 ntBASIC5.57□□□□□ -1.52
RNF40O75150 RNU6-541P-201ENST00000384709 110 ntBASIC5.57□□□□□ -1.52
RNF40O75150 MIR487A-201ENST00000385009 80 ntBASIC5.57□□□□□ -1.52
RNF40O75150 Z85995.1-201ENST00000415547 335 ntBASIC5.57□□□□□ -1.52
RNF40O75150 SRSF1P1-201ENST00000424058 520 ntBASIC5.57□□□□□ -1.52
RNF40O75150 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF40O75150 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.57□□□□□ -1.52
RNF40O75150 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RNF40O75150 AC092798.1-201ENST00000458542 409 ntBASIC5.57□□□□□ -1.52
RNF40O75150 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF40O75150 RN7SKP179-201ENST00000516126 217 ntBASIC5.57□□□□□ -1.52
RNF40O75150 SCARNA16.4-201ENST00000516956 187 ntBASIC5.57□□□□□ -1.52
RNF40O75150 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF40O75150 RPL10P14-201ENST00000565265 298 ntBASIC5.57□□□□□ -1.52
RNF40O75150 MIR4744-201ENST00000581563 82 ntBASIC5.57□□□□□ -1.52
RNF40O75150 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.57□□□□□ -1.52
RNF40O75150 AP002799.1-201ENST00000623552 423 ntBASIC5.57□□□□□ -1.52
RNF40O75150 SNORA43.4-201ENST00000629559 138 ntBASIC5.57□□□□□ -1.52
RNF40O75150 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RNF40O75150 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RNF40O75150 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.57□□□□□ -1.52
RNF40O75150 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.57□□□□□ -1.52
RNF40O75150 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RNF40O75150 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF40O75150 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.56□□□□□ -1.52
RNF40O75150 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.56□□□□□ -1.52
RNF40O75150 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.56□□□□□ -1.52
RNF40O75150 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.56□□□□□ -1.52
RNF40O75150 RNU6-72P-201ENST00000384285 79 ntBASIC5.56□□□□□ -1.52
RNF40O75150 MIR514A1-201ENST00000385133 98 ntBASIC5.56□□□□□ -1.52
RNF40O75150 U3.36-201ENST00000408418 213 ntBASIC5.56□□□□□ -1.52
RNF40O75150 AC093162.1-201ENST00000419682 124 ntBASIC5.56□□□□□ -1.52
RNF40O75150 RPL7AP61-201ENST00000443410 636 ntBASIC5.56□□□□□ -1.52
RNF40O75150 GEMIN8P3-201ENST00000445417 720 ntBASIC5.56□□□□□ -1.52
RNF40O75150 AL591473.1-201ENST00000464297 313 ntBASIC5.56□□□□□ -1.52
RNF40O75150 RPS20P22-201ENST00000473700 357 ntBASIC5.56□□□□□ -1.52
RNF40O75150 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC5.56□□□□□ -1.52
RNF40O75150 RN7SL346P-201ENST00000491561 294 ntBASIC5.56□□□□□ -1.52
RNF40O75150 FCF1P8-201ENST00000510322 597 ntBASIC5.56□□□□□ -1.52
RNF40O75150 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.56□□□□□ -1.52
RNF40O75150 RNU6-58P-201ENST00000517143 103 ntBASIC5.56□□□□□ -1.52
RNF40O75150 AC090281.1-201ENST00000523019 276 ntBASIC5.56□□□□□ -1.52
RNF40O75150 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RNF40O75150 AC136624.4-201ENST00000573044 370 ntBASIC5.56□□□□□ -1.52
RNF40O75150 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.56□□□□□ -1.52
RNF40O75150 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.56□□□□□ -1.52
RNF40O75150 AC244107.2-201ENST00000611773 76 ntBASIC5.56□□□□□ -1.52
RNF40O75150 AC100827.5-201ENST00000615883 426 ntBASIC5.56□□□□□ -1.52
RNF40O75150 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.56□□□□□ -1.52
RNF40O75150 AC074101.1-201ENST00000637861 241 ntBASIC5.56□□□□□ -1.52
RNF40O75150 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF40O75150 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF40O75150 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.56□□□□□ -1.52
RNF40O75150 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.56□□□□□ -1.52
RNF40O75150 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.56□□□□□ -1.52
RNF40O75150 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF40O75150 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RNF40O75150 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF40O75150 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF40O75150 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RNF40O75150 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RNF40O75150 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.55□□□□□ -1.52
RNF40O75150 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF40O75150 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.55□□□□□ -1.52
RNF40O75150 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC5.55□□□□□ -1.52
RNF40O75150 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.55□□□□□ -1.52
RNF40O75150 AL357134.1-201ENST00000445848 426 ntBASIC5.55□□□□□ -1.52
RNF40O75150 RPS20P10-201ENST00000451209 253 ntBASIC5.55□□□□□ -1.52
RNF40O75150 AC092991.1-201ENST00000477176 376 ntBASIC5.55□□□□□ -1.52
RNF40O75150 RN7SKP234-201ENST00000517173 224 ntBASIC5.55□□□□□ -1.52
RNF40O75150 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.55□□□□□ -1.52
RNF40O75150 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.55□□□□□ -1.52
RNF40O75150 DEFB117-201ENST00000602356 141 ntBASIC5.55□□□□□ -1.52
RNF40O75150 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC5.55□□□□□ -1.52
RNF40O75150 AC011603.4-201ENST00000611325 277 ntBASIC5.55□□□□□ -1.52
RNF40O75150 SCARNA4-202ENST00000625402 129 ntBASIC5.55□□□□□ -1.52
RNF40O75150 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.55□□□□□ -1.52
RNF40O75150 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.55□□□□□ -1.52
RNF40O75150 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF40O75150 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF40O75150 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF40O75150 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
RNF40O75150 ANKRD30BP1-201ENST00000451052 2186 ntBASIC5.55□□□□□ -1.52
RNF40O75150 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF40O75150 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
RNF40O75150 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RNF40O75150 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF40O75150 RNU6-103P-201ENST00000363686 107 ntBASIC5.54□□□□□ -1.52
RNF40O75150 snoU2_19.4-201ENST00000364329 80 ntBASIC5.54□□□□□ -1.52
RNF40O75150 RNA5SP296-201ENST00000410523 111 ntBASIC5.54□□□□□ -1.52
RNF40O75150 RPL36AP10-201ENST00000421785 322 ntBASIC5.54□□□□□ -1.52
RNF40O75150 AC007161.1-204ENST00000423039 460 ntBASIC5.54□□□□□ -1.52
RNF40O75150 AL078601.1-201ENST00000444542 271 ntBASIC5.54□□□□□ -1.52
RNF40O75150 AL049874.1-201ENST00000489560 388 ntBASIC5.54□□□□□ -1.52
RNF40O75150 RNU6-168P-201ENST00000516189 101 ntBASIC5.54□□□□□ -1.52
RNF40O75150 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF40O75150 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.54□□□□□ -1.52
RNF40O75150 AC016256.1-201ENST00000547971 354 ntBASIC5.54□□□□□ -1.52
RNF40O75150 AC233702.9-201ENST00000581528 203 ntBASIC5.54□□□□□ -1.52
RNF40O75150 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms