Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM13O60858 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM13O60858 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM13O60858 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM13O60858 RNU6-1317P-201ENST00000364582 104 ntBASIC4.1□□□□□ -1.75
TRIM13O60858 RNU6-1303P-201ENST00000364841 107 ntBASIC4.1□□□□□ -1.75
TRIM13O60858 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.1□□□□□ -1.75
TRIM13O60858 RNU6-45P-201ENST00000384471 107 ntBASIC4.1□□□□□ -1.75
TRIM13O60858 SNORD115-46-201ENST00000390982 71 ntBASIC4.1□□□□□ -1.75
TRIM13O60858 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM13O60858 AC016712.1-201ENST00000431088 378 ntBASIC4.1□□□□□ -1.75
TRIM13O60858 AC011742.1-201ENST00000431448 434 ntBASIC4.1□□□□□ -1.75
TRIM13O60858 AL445305.1-201ENST00000432577 575 ntBASIC4.1□□□□□ -1.75
TRIM13O60858 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM13O60858 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM13O60858 AC008264.1-201ENST00000447612 367 ntBASIC4.1□□□□□ -1.75
TRIM13O60858 snoU13.3-201ENST00000459441 104 ntBASIC4.1□□□□□ -1.75
TRIM13O60858 RN7SL354P-201ENST00000469282 294 ntBASIC4.1□□□□□ -1.75
TRIM13O60858 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.1□□□□□ -1.75
TRIM13O60858 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM13O60858 AL592156.1-201ENST00000508758 304 ntBASIC4.1□□□□□ -1.75
TRIM13O60858 RNU6-346P-201ENST00000516288 111 ntBASIC4.1□□□□□ -1.75
TRIM13O60858 ERHP1-201ENST00000523006 310 ntBASIC4.1□□□□□ -1.75
TRIM13O60858 AC024405.2-202ENST00000532731 184 ntBASIC4.1□□□□□ -1.75
TRIM13O60858 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM13O60858 AC044860.2-201ENST00000561005 179 ntBASIC4.1□□□□□ -1.75
TRIM13O60858 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM13O60858 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM13O60858 AL160281.1-201ENST00000605307 311 ntBASIC4.1□□□□□ -1.75
TRIM13O60858 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM13O60858 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM13O60858 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
TRIM13O60858 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM13O60858 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM13O60858 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM13O60858 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM13O60858 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM13O60858 AP000560.1-201ENST00000624150 1937 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.09□□□□□ -1.75
TRIM13O60858 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM13O60858 RNU6-708P-201ENST00000384217 107 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 Y_RNA.480-201ENST00000384364 102 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 RNU6-790P-201ENST00000384479 105 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 MIR105-2-201ENST00000385083 81 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 RNU2-20P-201ENST00000410425 191 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 RNU4-78P-201ENST00000410940 126 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 AL030996.1-201ENST00000411430 235 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM13O60858 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM13O60858 RPEP3-201ENST00000425462 676 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM13O60858 AC011998.1-201ENST00000433403 117 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 OR4C10P-201ENST00000434991 931 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 PHBP16-201ENST00000446318 950 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 NDUFB4P10-201ENST00000452541 359 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 AC009963.2-201ENST00000453431 138 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 RN7SL177P-201ENST00000476596 299 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 RPL31P60-201ENST00000478450 367 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 AC083982.1-201ENST00000485679 344 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 RPL31P61-201ENST00000496160 376 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM13O60858 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 ACA59.1-201ENST00000515966 143 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 RNU7-200P-201ENST00000516105 62 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 RNU6-861P-201ENST00000516745 106 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 AC090281.1-201ENST00000523019 276 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 AC004024.1-201ENST00000549244 247 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 MIR4643-201ENST00000577473 78 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.09□□□□□ -1.75
TRIM13O60858 AP001485.1-201ENST00000604799 199 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 FAM25E-202ENST00000608562 189 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 AC099669.2-201ENST00000616549 437 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 AC007998.5-201ENST00000622938 237 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM13O60858 AL773545.4-201ENST00000637262 310 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 AL513478.4-201ENST00000641636 310 ntBASIC4.09□□□□□ -1.75
TRIM13O60858 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
TRIM13O60858 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TRIM13O60858 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM13O60858 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM13O60858 Y_RNA.16-201ENST00000362421 102 ntBASIC4.08□□□□□ -1.76
TRIM13O60858 RNU1-14P-201ENST00000362759 152 ntBASIC4.08□□□□□ -1.76
TRIM13O60858 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM13O60858 RNU6-701P-201ENST00000384059 107 ntBASIC4.08□□□□□ -1.76
TRIM13O60858 SNORA69.1-201ENST00000390904 137 ntBASIC4.08□□□□□ -1.76
TRIM13O60858 RNU6-837P-201ENST00000391056 108 ntBASIC4.08□□□□□ -1.76
TRIM13O60858 U3.42-201ENST00000408746 214 ntBASIC4.08□□□□□ -1.76
TRIM13O60858 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM13O60858 Y_RNA.592-201ENST00000410274 109 ntBASIC4.08□□□□□ -1.76
TRIM13O60858 RNU2-51P-201ENST00000410708 197 ntBASIC4.08□□□□□ -1.76
TRIM13O60858 AC092423.1-201ENST00000430165 186 ntBASIC4.08□□□□□ -1.76
TRIM13O60858 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM13O60858 RPL23AP22-201ENST00000437556 453 ntBASIC4.08□□□□□ -1.76
TRIM13O60858 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM13O60858 RPL7P23-201ENST00000493874 747 ntBASIC4.08□□□□□ -1.76
TRIM13O60858 SERF1AP1-201ENST00000514575 187 ntBASIC4.08□□□□□ -1.76
TRIM13O60858 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM13O60858 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM13O60858 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM13O60858 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms