Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC130650.2-201ENST00000618736 2403 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.96□□□□□ -1.94
CACNA1FO60840 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.96□□□□□ -1.94
CACNA1FO60840 RNA5SP391-201ENST00000363456 119 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 RNU4-1-201ENST00000363925 141 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 SNORA51.2-201ENST00000364595 132 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 AL445529.1-201ENST00000398713 389 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.96□□□□□ -1.94
CACNA1FO60840 RPL31P35-201ENST00000431058 377 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 CKS1BP5-201ENST00000434172 273 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 MTND4LP10-201ENST00000435146 291 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 CR769767.1-201ENST00000436337 346 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 AC098614.3-201ENST00000438957 440 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 AC016691.1-201ENST00000441321 413 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 RPL9P32-201ENST00000464118 620 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.96□□□□□ -1.94
CACNA1FO60840 AC093767.1-201ENST00000504523 156 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 AC110792.2-201ENST00000510278 224 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.96□□□□□ -1.94
CACNA1FO60840 RNA5SP24-201ENST00000516478 95 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.96□□□□□ -1.94
CACNA1FO60840 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.96□□□□□ -1.94
CACNA1FO60840 SETP2-201ENST00000553886 926 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.96□□□□□ -1.94
CACNA1FO60840 MIR5007-201ENST00000583098 95 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.96□□□□□ -1.94
CACNA1FO60840 AC104984.5-201ENST00000586878 94 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 AC112191.3-201ENST00000604371 277 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 U73479.1-201ENST00000618062 168 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 AC009831.4-201ENST00000620744 325 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 AL158801.5-201ENST00000623123 465 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.96□□□□□ -1.94
CACNA1FO60840 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.95□□□□□ -1.94
CACNA1FO60840 AC092326.2-201ENST00000624772 1561 ntBASIC2.95□□□□□ -1.94
CACNA1FO60840 CASC19-280ENST00000642102 1351 ntBASIC2.95□□□□□ -1.94
CACNA1FO60840 RNU6-853P-201ENST00000364306 107 ntBASIC2.95□□□□□ -1.94
CACNA1FO60840 RNU6-343P-201ENST00000364709 104 ntBASIC2.95□□□□□ -1.94
CACNA1FO60840 RNU6-108P-201ENST00000365558 107 ntBASIC2.95□□□□□ -1.94
CACNA1FO60840 MIR649-201ENST00000384843 97 ntBASIC2.95□□□□□ -1.94
CACNA1FO60840 SAR1AP2-201ENST00000392696 594 ntBASIC2.95□□□□□ -1.94
CACNA1FO60840 AC068050.1-201ENST00000394891 380 ntBASIC2.95□□□□□ -1.94
CACNA1FO60840 DSTNP4-201ENST00000399472 474 ntBASIC2.95□□□□□ -1.94
CACNA1FO60840 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.95□□□□□ -1.94
CACNA1FO60840 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.95□□□□□ -1.94
CACNA1FO60840 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.95□□□□□ -1.94
CACNA1FO60840 MTND4P28-201ENST00000426217 387 ntBASIC2.95□□□□□ -1.94
CACNA1FO60840 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.95□□□□□ -1.94
CACNA1FO60840 AC133104.1-201ENST00000429100 218 ntBASIC2.95□□□□□ -1.94
CACNA1FO60840 AC011816.1-201ENST00000441346 546 ntBASIC2.95□□□□□ -1.94
CACNA1FO60840 AC079448.1-201ENST00000449377 373 ntBASIC2.95□□□□□ -1.94
CACNA1FO60840 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.95□□□□□ -1.94
CACNA1FO60840 RNF138P1-201ENST00000502765 546 ntBASIC2.95□□□□□ -1.94
CACNA1FO60840 MTCO2P30-201ENST00000503662 364 ntBASIC2.95□□□□□ -1.94
CACNA1FO60840 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.95□□□□□ -1.94
CACNA1FO60840 MTND3P22-201ENST00000510932 243 ntBASIC2.95□□□□□ -1.94
CACNA1FO60840 Vault.3-201ENST00000516676 95 ntBASIC2.95□□□□□ -1.94
CACNA1FO60840 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.95□□□□□ -1.94
CACNA1FO60840 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.95□□□□□ -1.94
CACNA1FO60840 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.95□□□□□ -1.94
CACNA1FO60840 AL359212.1-201ENST00000556608 614 ntBASIC2.95□□□□□ -1.94
CACNA1FO60840 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.95□□□□□ -1.94
CACNA1FO60840 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.95□□□□□ -1.94
CACNA1FO60840 AC012150.2-201ENST00000621300 544 ntBASIC2.95□□□□□ -1.94
CACNA1FO60840 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CACNA1FO60840 MIR1291-201ENST00000627649 87 ntBASIC2.95□□□□□ -1.94
CACNA1FO60840 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CACNA1FO60840 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
CACNA1FO60840 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CACNA1FO60840 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
CACNA1FO60840 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.94□□□□□ -1.94
CACNA1FO60840 Y_RNA.409-201ENST00000383990 98 ntBASIC2.94□□□□□ -1.94
CACNA1FO60840 RNU6-456P-201ENST00000384493 107 ntBASIC2.94□□□□□ -1.94
CACNA1FO60840 RPL21P111-201ENST00000418453 477 ntBASIC2.94□□□□□ -1.94
CACNA1FO60840 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.94□□□□□ -1.94
CACNA1FO60840 RPS29P25-201ENST00000481709 171 ntBASIC2.94□□□□□ -1.94
CACNA1FO60840 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.94□□□□□ -1.94
CACNA1FO60840 RNU6-201P-201ENST00000517100 61 ntBASIC2.94□□□□□ -1.94
CACNA1FO60840 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.94□□□□□ -1.94
CACNA1FO60840 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.94□□□□□ -1.94
CACNA1FO60840 AC123904.2-201ENST00000548059 300 ntBASIC2.94□□□□□ -1.94
CACNA1FO60840 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.94□□□□□ -1.94
CACNA1FO60840 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.94□□□□□ -1.94
CACNA1FO60840 C8orf59P2-201ENST00000603441 271 ntBASIC2.94□□□□□ -1.94
CACNA1FO60840 AC097468.3-201ENST00000607956 456 ntBASIC2.94□□□□□ -1.94
CACNA1FO60840 AC009318.4-201ENST00000620496 486 ntBASIC2.94□□□□□ -1.94
CACNA1FO60840 AC112487.2-201ENST00000637950 304 ntBASIC2.94□□□□□ -1.94
CACNA1FO60840 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CACNA1FO60840 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CACNA1FO60840 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CACNA1FO60840 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CACNA1FO60840 RNU6-332P-201ENST00000391193 108 ntBASIC2.94□□□□□ -1.94
CACNA1FO60840 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.94□□□□□ -1.94
CACNA1FO60840 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.94□□□□□ -1.94
CACNA1FO60840 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.94□□□□□ -1.94
CACNA1FO60840 MTCO2P5-201ENST00000422621 426 ntBASIC2.94□□□□□ -1.94
CACNA1FO60840 AC007283.2-201ENST00000424739 197 ntBASIC2.94□□□□□ -1.94
CACNA1FO60840 AL035410.1-201ENST00000427409 427 ntBASIC2.94□□□□□ -1.94
CACNA1FO60840 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.94□□□□□ -1.94
CACNA1FO60840 HSPE1P28-201ENST00000443139 211 ntBASIC2.94□□□□□ -1.94
CACNA1FO60840 AP000542.1-201ENST00000448473 371 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms