Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 AC130324.3-201ENST00000614165 542 ntBASIC4.63□□□□□ -1.67
SMARCA5O60264 AC091925.1-201ENST00000623204 462 ntBASIC4.63□□□□□ -1.67
SMARCA5O60264 AC103710.2-202ENST00000641454 2853 ntBASIC4.63□□□□□ -1.67
SMARCA5O60264 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SMARCA5O60264 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SMARCA5O60264 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.63□□□□□ -1.67
SMARCA5O60264 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SMARCA5O60264 AC073073.2-201ENST00000609827 2578 ntBASIC4.62□□□□□ -1.67
SMARCA5O60264 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.62□□□□□ -1.67
SMARCA5O60264 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SMARCA5O60264 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SMARCA5O60264 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SMARCA5O60264 RNU6-1252P-201ENST00000363054 104 ntBASIC4.62□□□□□ -1.67
SMARCA5O60264 Y_RNA.187-201ENST00000363918 113 ntBASIC4.62□□□□□ -1.67
SMARCA5O60264 SNORA24.1-201ENST00000384401 135 ntBASIC4.62□□□□□ -1.67
SMARCA5O60264 RNU6-505P-201ENST00000384427 107 ntBASIC4.62□□□□□ -1.67
SMARCA5O60264 RNU6-140P-201ENST00000384566 108 ntBASIC4.62□□□□□ -1.67
SMARCA5O60264 Y_RNA.530-201ENST00000384587 101 ntBASIC4.62□□□□□ -1.67
SMARCA5O60264 MIR301A-201ENST00000385261 86 ntBASIC4.62□□□□□ -1.67
SMARCA5O60264 RPL23AP82-202ENST00000427528 469 ntBASIC4.62□□□□□ -1.67
SMARCA5O60264 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.62□□□□□ -1.67
SMARCA5O60264 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.62□□□□□ -1.67
SMARCA5O60264 AL162395.1-201ENST00000457882 422 ntBASIC4.62□□□□□ -1.67
SMARCA5O60264 RNU7-182P-201ENST00000459009 62 ntBASIC4.62□□□□□ -1.67
SMARCA5O60264 RPS15AP34-201ENST00000487776 387 ntBASIC4.62□□□□□ -1.67
SMARCA5O60264 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.62□□□□□ -1.67
SMARCA5O60264 MIR3668-201ENST00000582138 75 ntBASIC4.62□□□□□ -1.67
SMARCA5O60264 AC007938.3-201ENST00000604965 623 ntBASIC4.62□□□□□ -1.67
SMARCA5O60264 RNU1-30P-201ENST00000606575 163 ntBASIC4.62□□□□□ -1.67
SMARCA5O60264 AC092807.2-201ENST00000609367 243 ntBASIC4.62□□□□□ -1.67
SMARCA5O60264 AL391261.4-201ENST00000616012 481 ntBASIC4.62□□□□□ -1.67
SMARCA5O60264 AC025034.2-201ENST00000623264 286 ntBASIC4.62□□□□□ -1.67
SMARCA5O60264 U6.114-201ENST00000636407 96 ntBASIC4.62□□□□□ -1.67
SMARCA5O60264 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
SMARCA5O60264 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
SMARCA5O60264 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SMARCA5O60264 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SMARCA5O60264 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SMARCA5O60264 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SMARCA5O60264 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
SMARCA5O60264 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
SMARCA5O60264 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
SMARCA5O60264 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SMARCA5O60264 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SMARCA5O60264 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SMARCA5O60264 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
SMARCA5O60264 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SMARCA5O60264 Y_RNA.28-201ENST00000362554 111 ntBASIC4.61□□□□□ -1.67
SMARCA5O60264 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.61□□□□□ -1.67
SMARCA5O60264 AL139397.2-201ENST00000404529 772 ntBASIC4.61□□□□□ -1.67
SMARCA5O60264 RN7SKP156-201ENST00000410308 342 ntBASIC4.61□□□□□ -1.67
SMARCA5O60264 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.61□□□□□ -1.67
SMARCA5O60264 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.61□□□□□ -1.67
SMARCA5O60264 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.61□□□□□ -1.67
SMARCA5O60264 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.61□□□□□ -1.67
SMARCA5O60264 FABP5P13-201ENST00000452144 328 ntBASIC4.61□□□□□ -1.67
SMARCA5O60264 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.61□□□□□ -1.67
SMARCA5O60264 FABP5P15-201ENST00000453566 214 ntBASIC4.61□□□□□ -1.67
SMARCA5O60264 HMGN2P13-201ENST00000476476 274 ntBASIC4.61□□□□□ -1.67
SMARCA5O60264 RPL7P43-201ENST00000478876 753 ntBASIC4.61□□□□□ -1.67
SMARCA5O60264 AC091885.1-201ENST00000506658 268 ntBASIC4.61□□□□□ -1.67
SMARCA5O60264 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.61□□□□□ -1.67
SMARCA5O60264 SMURF2P1-201ENST00000514992 481 ntBASIC4.61□□□□□ -1.67
SMARCA5O60264 CYCSP30-201ENST00000546447 172 ntBASIC4.61□□□□□ -1.67
SMARCA5O60264 AC106785.1-201ENST00000565935 262 ntBASIC4.61□□□□□ -1.67
SMARCA5O60264 AC024619.4-201ENST00000580924 316 ntBASIC4.61□□□□□ -1.67
SMARCA5O60264 AC022893.3-201ENST00000607665 437 ntBASIC4.61□□□□□ -1.67
SMARCA5O60264 FTX_3.1-201ENST00000610451 147 ntBASIC4.61□□□□□ -1.67
SMARCA5O60264 AC012409.4-201ENST00000612923 249 ntBASIC4.61□□□□□ -1.67
SMARCA5O60264 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SMARCA5O60264 AC007792.1-201ENST00000623023 402 ntBASIC4.61□□□□□ -1.67
SMARCA5O60264 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SMARCA5O60264 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SMARCA5O60264 API5P2-201ENST00000397055 1498 ntBASIC4.61□□□□□ -1.67
SMARCA5O60264 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SMARCA5O60264 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SMARCA5O60264 NCAPGP1-201ENST00000505112 1814 ntBASIC4.6□□□□□ -1.67
SMARCA5O60264 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
SMARCA5O60264 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.6□□□□□ -1.67
SMARCA5O60264 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SMARCA5O60264 Y_RNA.148-201ENST00000363557 117 ntBASIC4.6□□□□□ -1.67
SMARCA5O60264 RNU6-288P-201ENST00000363690 104 ntBASIC4.6□□□□□ -1.67
SMARCA5O60264 RNU6-61P-201ENST00000365528 109 ntBASIC4.6□□□□□ -1.67
SMARCA5O60264 RNU6-1106P-201ENST00000390845 107 ntBASIC4.6□□□□□ -1.67
SMARCA5O60264 RN7SKP158-201ENST00000410453 326 ntBASIC4.6□□□□□ -1.67
SMARCA5O60264 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.6□□□□□ -1.67
SMARCA5O60264 RPL31P12-201ENST00000422587 358 ntBASIC4.6□□□□□ -1.67
SMARCA5O60264 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.6□□□□□ -1.67
SMARCA5O60264 AL591419.1-201ENST00000427423 339 ntBASIC4.6□□□□□ -1.67
SMARCA5O60264 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.6□□□□□ -1.67
SMARCA5O60264 AL591704.1-201ENST00000432574 275 ntBASIC4.6□□□□□ -1.67
SMARCA5O60264 HSPD1P21-201ENST00000436541 245 ntBASIC4.6□□□□□ -1.67
SMARCA5O60264 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.6□□□□□ -1.67
SMARCA5O60264 RPS24P13-201ENST00000442520 397 ntBASIC4.6□□□□□ -1.67
SMARCA5O60264 MTCO3P10-201ENST00000455912 772 ntBASIC4.6□□□□□ -1.67
SMARCA5O60264 U3.44-201ENST00000458938 192 ntBASIC4.6□□□□□ -1.67
SMARCA5O60264 TRBVA-201ENST00000498804 316 ntBASIC4.6□□□□□ -1.67
SMARCA5O60264 SNORD59.2-201ENST00000516873 68 ntBASIC4.6□□□□□ -1.67
SMARCA5O60264 RNA5SP471-201ENST00000516971 106 ntBASIC4.6□□□□□ -1.67
SMARCA5O60264 IGKV2-23-201ENST00000518729 323 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms