Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.34□□□□□ -2.03
RIPK2O43353 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RIPK2O43353 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RIPK2O43353 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.34□□□□□ -2.03
RIPK2O43353 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RIPK2O43353 AF228730.1-201ENST00000397972 663 ntBASIC2.34□□□□□ -2.03
RIPK2O43353 AL591416.1-201ENST00000404015 867 ntBASIC2.34□□□□□ -2.03
RIPK2O43353 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.34□□□□□ -2.03
RIPK2O43353 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.34□□□□□ -2.03
RIPK2O43353 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.34□□□□□ -2.03
RIPK2O43353 MTATP6P17-201ENST00000431030 672 ntBASIC2.34□□□□□ -2.03
RIPK2O43353 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.34□□□□□ -2.03
RIPK2O43353 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.34□□□□□ -2.03
RIPK2O43353 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.34□□□□□ -2.03
RIPK2O43353 AP001324.2-201ENST00000461163 319 ntBASIC2.34□□□□□ -2.03
RIPK2O43353 AC018437.1-201ENST00000492214 406 ntBASIC2.34□□□□□ -2.03
RIPK2O43353 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.34□□□□□ -2.03
RIPK2O43353 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.34□□□□□ -2.03
RIPK2O43353 AC010486.2-201ENST00000505572 483 ntBASIC2.34□□□□□ -2.03
RIPK2O43353 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.34□□□□□ -2.03
RIPK2O43353 RNU6-759P-201ENST00000516740 103 ntBASIC2.34□□□□□ -2.03
RIPK2O43353 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.34□□□□□ -2.03
RIPK2O43353 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.34□□□□□ -2.03
RIPK2O43353 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.34□□□□□ -2.03
RIPK2O43353 AC090616.2-202ENST00000584248 222 ntBASIC2.34□□□□□ -2.03
RIPK2O43353 AC078899.2-201ENST00000595282 212 ntBASIC2.34□□□□□ -2.03
RIPK2O43353 AC009090.3-201ENST00000616553 565 ntBASIC2.34□□□□□ -2.03
RIPK2O43353 MIR6766-201ENST00000622641 72 ntBASIC2.34□□□□□ -2.03
RIPK2O43353 AL137790.1-201ENST00000634283 177 ntBASIC2.34□□□□□ -2.03
RIPK2O43353 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
RIPK2O43353 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RIPK2O43353 AL596028.1-201ENST00000326971 197 ntBASIC2.33□□□□□ -2.04
RIPK2O43353 RNU6-525P-201ENST00000363685 104 ntBASIC2.33□□□□□ -2.04
RIPK2O43353 Y_RNA.169-201ENST00000363745 96 ntBASIC2.33□□□□□ -2.04
RIPK2O43353 RNU6-769P-201ENST00000384407 104 ntBASIC2.33□□□□□ -2.04
RIPK2O43353 MIR1302-8-201ENST00000408342 128 ntBASIC2.33□□□□□ -2.04
RIPK2O43353 RPL23AP39-201ENST00000415533 405 ntBASIC2.33□□□□□ -2.04
RIPK2O43353 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.33□□□□□ -2.04
RIPK2O43353 RPS6P15-201ENST00000431996 751 ntBASIC2.33□□□□□ -2.04
RIPK2O43353 CETN4P-201ENST00000432407 469 ntBASIC2.33□□□□□ -2.04
RIPK2O43353 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.33□□□□□ -2.04
RIPK2O43353 AL445567.1-201ENST00000439121 144 ntBASIC2.33□□□□□ -2.04
RIPK2O43353 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.33□□□□□ -2.04
RIPK2O43353 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.33□□□□□ -2.04
RIPK2O43353 AC108059.3-201ENST00000456388 214 ntBASIC2.33□□□□□ -2.04
RIPK2O43353 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.33□□□□□ -2.04
RIPK2O43353 AC117503.1-201ENST00000472241 394 ntBASIC2.33□□□□□ -2.04
RIPK2O43353 RPL23AP41-201ENST00000484754 458 ntBASIC2.33□□□□□ -2.04
RIPK2O43353 AC096576.1-201ENST00000489014 359 ntBASIC2.33□□□□□ -2.04
RIPK2O43353 AC055855.1-201ENST00000489563 579 ntBASIC2.33□□□□□ -2.04
RIPK2O43353 AC005178.1-201ENST00000508392 440 ntBASIC2.33□□□□□ -2.04
RIPK2O43353 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.33□□□□□ -2.04
RIPK2O43353 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.33□□□□□ -2.04
RIPK2O43353 RNU6-678P-201ENST00000516832 109 ntBASIC2.33□□□□□ -2.04
RIPK2O43353 RNU6-232P-201ENST00000517144 64 ntBASIC2.33□□□□□ -2.04
RIPK2O43353 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.33□□□□□ -2.04
RIPK2O43353 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.33□□□□□ -2.04
RIPK2O43353 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.33□□□□□ -2.04
RIPK2O43353 AP004247.1-201ENST00000531556 1289 ntBASIC2.33□□□□□ -2.04
RIPK2O43353 AC013828.2-201ENST00000532487 235 ntBASIC2.33□□□□□ -2.04
RIPK2O43353 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.33□□□□□ -2.04
RIPK2O43353 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.33□□□□□ -2.04
RIPK2O43353 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.33□□□□□ -2.04
RIPK2O43353 MIR4293-201ENST00000584305 78 ntBASIC2.33□□□□□ -2.04
RIPK2O43353 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.33□□□□□ -2.04
RIPK2O43353 BNIP3P23-201ENST00000599655 511 ntBASIC2.33□□□□□ -2.04
RIPK2O43353 AC073544.2-201ENST00000601155 540 ntBASIC2.33□□□□□ -2.04
RIPK2O43353 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.33□□□□□ -2.04
RIPK2O43353 AL138963.2-201ENST00000605137 226 ntBASIC2.33□□□□□ -2.04
RIPK2O43353 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RIPK2O43353 AL442067.2-201ENST00000614033 363 ntBASIC2.33□□□□□ -2.04
RIPK2O43353 AC012150.2-201ENST00000621300 544 ntBASIC2.33□□□□□ -2.04
RIPK2O43353 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.33□□□□□ -2.04
RIPK2O43353 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RIPK2O43353 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.33□□□□□ -2.04
RIPK2O43353 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.33□□□□□ -2.04
RIPK2O43353 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.32□□□□□ -2.04
RIPK2O43353 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RIPK2O43353 Y_RNA.97-201ENST00000363094 102 ntBASIC2.32□□□□□ -2.04
RIPK2O43353 RNU6-553P-201ENST00000364047 96 ntBASIC2.32□□□□□ -2.04
RIPK2O43353 RNA5SP240-201ENST00000365355 128 ntBASIC2.32□□□□□ -2.04
RIPK2O43353 HMGB1P11-201ENST00000413899 637 ntBASIC2.32□□□□□ -2.04
RIPK2O43353 MORF4L1P6-201ENST00000418771 268 ntBASIC2.32□□□□□ -2.04
RIPK2O43353 LARP1BP3-201ENST00000437229 869 ntBASIC2.32□□□□□ -2.04
RIPK2O43353 AC018634.1-201ENST00000437554 401 ntBASIC2.32□□□□□ -2.04
RIPK2O43353 AC107083.1-201ENST00000439643 279 ntBASIC2.32□□□□□ -2.04
RIPK2O43353 BRK1P2-201ENST00000442875 223 ntBASIC2.32□□□□□ -2.04
RIPK2O43353 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.32□□□□□ -2.04
RIPK2O43353 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.32□□□□□ -2.04
RIPK2O43353 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.32□□□□□ -2.04
RIPK2O43353 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RIPK2O43353 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.32□□□□□ -2.04
RIPK2O43353 DEFB108A-201ENST00000530110 222 ntBASIC2.32□□□□□ -2.04
RIPK2O43353 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.32□□□□□ -2.04
RIPK2O43353 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.32□□□□□ -2.04
RIPK2O43353 AP001004.1-201ENST00000582468 324 ntBASIC2.32□□□□□ -2.04
RIPK2O43353 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.32□□□□□ -2.04
RIPK2O43353 AC007938.3-201ENST00000604965 623 ntBASIC2.32□□□□□ -2.04
RIPK2O43353 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
RIPK2O43353 MIR5739-201ENST00000619803 80 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms