Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 RNU6-685P-201ENST00000517088 95 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.5□□□□□ -2.01
SRRM4A7MD48 AP001646.1-201ENST00000527936 915 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.5□□□□□ -2.01
SRRM4A7MD48 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.5□□□□□ -2.01
SRRM4A7MD48 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.5□□□□□ -2.01
SRRM4A7MD48 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.5□□□□□ -2.01
SRRM4A7MD48 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.5□□□□□ -2.01
SRRM4A7MD48 H3F3AP1-201ENST00000559984 334 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 AC024619.4-201ENST00000580924 316 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 AC020895.1-201ENST00000595362 272 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 AL138889.2-201ENST00000603883 242 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 AF250324.2-201ENST00000608299 610 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 U4.5-201ENST00000617137 123 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 AC024940.5-201ENST00000622889 474 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 AC005609.4-201ENST00000625071 447 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 AL157786.1-207ENST00000627771 695 ntBASIC2.5□□□□□ -2.01
SRRM4A7MD48 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SRRM4A7MD48 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
SRRM4A7MD48 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.5□□□□□ -2.01
SRRM4A7MD48 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SRRM4A7MD48 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SRRM4A7MD48 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SRRM4A7MD48 RNU6-1120P-201ENST00000362988 108 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 RNU6-1283P-201ENST00000365314 105 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 Y_RNA.367-201ENST00000365544 101 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 RNU4-48P-201ENST00000365559 182 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
SRRM4A7MD48 SNORA48.7-201ENST00000391302 135 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 UBE2V1P2-201ENST00000397758 440 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 AL512633.1-201ENST00000399931 655 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.49□□□□□ -2.01
SRRM4A7MD48 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.49□□□□□ -2.01
SRRM4A7MD48 AC245054.2-201ENST00000415639 319 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.49□□□□□ -2.01
SRRM4A7MD48 SDCBPP3-201ENST00000419629 891 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 AL353678.1-201ENST00000422735 741 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 AL160275.3-201ENST00000423876 471 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.49□□□□□ -2.01
SRRM4A7MD48 GTF2IP20-201ENST00000431663 360 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 MTATP6P16-201ENST00000434543 526 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 UBE2V1P8-201ENST00000437166 265 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 AL078601.1-201ENST00000444542 271 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 OSTCP8-201ENST00000445117 448 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.49□□□□□ -2.01
SRRM4A7MD48 AL358232.1-201ENST00000448030 501 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.49□□□□□ -2.01
SRRM4A7MD48 AC079448.1-201ENST00000449377 373 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.49□□□□□ -2.01
SRRM4A7MD48 RPL31P41-201ENST00000477967 372 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 RN7SL20P-201ENST00000488827 297 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 HSPD1P15-201ENST00000505573 1122 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 HMGB1P29-201ENST00000505659 499 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 RNU6-123P-201ENST00000516163 102 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 OR5BN1P-201ENST00000532955 829 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 AC021739.1-201ENST00000559631 174 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 LINC00933-203ENST00000559812 219 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 AC234778.2-201ENST00000566241 354 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 MIR5692A1-201ENST00000580523 69 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 MIR548AC-201ENST00000585049 88 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.49□□□□□ -2.01
SRRM4A7MD48 AC010620.2-201ENST00000600135 313 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 AL645944.1-201ENST00000603857 493 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 AL121992.2-201ENST00000606262 256 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SRRM4A7MD48 AC136475.10-201ENST00000620253 385 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 AC002064.3-201ENST00000623448 346 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 AC018692.3-201ENST00000623929 123 ntBASIC2.49□□□□□ -2.01
SRRM4A7MD48 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.49□□□□□ -2.01
SRRM4A7MD48 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SRRM4A7MD48 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.49□□□□□ -2.01
SRRM4A7MD48 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.49□□□□□ -2.01
SRRM4A7MD48 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
SRRM4A7MD48 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SRRM4A7MD48 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SRRM4A7MD48 MIR412-201ENST00000362142 91 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 SNORA71.3-201ENST00000362582 128 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 Y_RNA.248-201ENST00000364501 109 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 Y_RNA.296-201ENST00000364930 108 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 SNORA4.3-201ENST00000365564 137 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.48□□□□□ -2.01
SRRM4A7MD48 SNORD21-201ENST00000383953 95 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 RNU6-1103P-201ENST00000384150 107 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 RNU6-74P-201ENST00000384235 107 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 SNORA7.4-201ENST00000384249 137 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 Y_RNA.554-201ENST00000384672 102 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 SNORD15B-201ENST00000384714 146 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 SNORA40C-201ENST00000391285 128 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 RPL17P50-201ENST00000396131 546 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 GSTA9P-201ENST00000406231 611 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 RNA5SP111-201ENST00000411386 101 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 AC023141.4-201ENST00000412031 328 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 AC022028.1-201ENST00000412054 408 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 AC005326.1-201ENST00000429197 123 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 SAR1AP4-201ENST00000429225 591 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 AC073464.1-201ENST00000429823 534 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.48□□□□□ -2.01
SRRM4A7MD48 AL596276.1-201ENST00000434465 418 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 AC244505.4-201ENST00000434905 287 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 RBMX2P4-201ENST00000441256 376 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms