Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.58□□□□□ -2
SYCE3A1L190 SNORA3.4-201ENST00000515969 96 ntBASIC2.58□□□□□ -2
SYCE3A1L190 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.58□□□□□ -2
SYCE3A1L190 AC010186.2-204ENST00000537668 439 ntBASIC2.58□□□□□ -2
SYCE3A1L190 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.58□□□□□ -2
SYCE3A1L190 AL021997.1-201ENST00000605757 193 ntBASIC2.58□□□□□ -2
SYCE3A1L190 AC034229.4-201ENST00000607861 441 ntBASIC2.58□□□□□ -2
SYCE3A1L190 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.58□□□□□ -2
SYCE3A1L190 AC010678.1-201ENST00000614118 713 ntBASIC2.58□□□□□ -2
SYCE3A1L190 AC092140.2-201ENST00000618027 521 ntBASIC2.58□□□□□ -2
SYCE3A1L190 AC092608.2-201ENST00000624427 218 ntBASIC2.58□□□□□ -2
SYCE3A1L190 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.58□□□□□ -2
SYCE3A1L190 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.58□□□□□ -2
SYCE3A1L190 U6.99-201ENST00000637524 83 ntBASIC2.58□□□□□ -2
SYCE3A1L190 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.58□□□□□ -2
SYCE3A1L190 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SYCE3A1L190 MTND5P30-201ENST00000452896 1731 ntBASIC2.57□□□□□ -2
SYCE3A1L190 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.57□□□□□ -2
SYCE3A1L190 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SYCE3A1L190 RNA5SP393-201ENST00000363423 117 ntBASIC2.57□□□□□ -2
SYCE3A1L190 RNU6-19P-201ENST00000384718 107 ntBASIC2.57□□□□□ -2
SYCE3A1L190 MIR144-201ENST00000384886 86 ntBASIC2.57□□□□□ -2
SYCE3A1L190 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SYCE3A1L190 HMGB3P2-201ENST00000411913 584 ntBASIC2.57□□□□□ -2
SYCE3A1L190 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.57□□□□□ -2
SYCE3A1L190 PTGES3P4-201ENST00000426243 356 ntBASIC2.57□□□□□ -2
SYCE3A1L190 AC018634.1-201ENST00000437554 401 ntBASIC2.57□□□□□ -2
SYCE3A1L190 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SYCE3A1L190 AC004383.1-201ENST00000438135 289 ntBASIC2.57□□□□□ -2
SYCE3A1L190 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.57□□□□□ -2
SYCE3A1L190 AC107083.1-201ENST00000439643 279 ntBASIC2.57□□□□□ -2
SYCE3A1L190 MTND5P2-201ENST00000442927 1142 ntBASIC2.57□□□□□ -2
SYCE3A1L190 SSXP1-201ENST00000453640 473 ntBASIC2.57□□□□□ -2
SYCE3A1L190 AC080013.2-201ENST00000460866 323 ntBASIC2.57□□□□□ -2
SYCE3A1L190 AC004263.1-201ENST00000479327 332 ntBASIC2.57□□□□□ -2
SYCE3A1L190 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.57□□□□□ -2
SYCE3A1L190 AC025755.1-201ENST00000521306 278 ntBASIC2.57□□□□□ -2
SYCE3A1L190 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.57□□□□□ -2
SYCE3A1L190 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.57□□□□□ -2
SYCE3A1L190 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.57□□□□□ -2
SYCE3A1L190 MIR5571-201ENST00000577998 113 ntBASIC2.57□□□□□ -2
SYCE3A1L190 AC105129.3-201ENST00000605455 485 ntBASIC2.57□□□□□ -2
SYCE3A1L190 AC103810.6-201ENST00000606708 136 ntBASIC2.57□□□□□ -2
SYCE3A1L190 AC022893.3-201ENST00000607665 437 ntBASIC2.57□□□□□ -2
SYCE3A1L190 MIR7844-201ENST00000616161 122 ntBASIC2.57□□□□□ -2
SYCE3A1L190 AL449363.1-201ENST00000617815 186 ntBASIC2.57□□□□□ -2
SYCE3A1L190 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
SYCE3A1L190 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.57□□□□□ -2
SYCE3A1L190 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
SYCE3A1L190 AC004944.1-201ENST00000517807 3059 ntBASIC2.56□□□□□ -2
SYCE3A1L190 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
SYCE3A1L190 AL109809.4-201ENST00000603520 2185 ntBASIC2.56□□□□□ -2
SYCE3A1L190 RNU4-1-201ENST00000363925 141 ntBASIC2.56□□□□□ -2
SYCE3A1L190 SNORA4.3-201ENST00000365564 137 ntBASIC2.56□□□□□ -2
SYCE3A1L190 MIR301A-201ENST00000385261 86 ntBASIC2.56□□□□□ -2
SYCE3A1L190 AC007064.1-201ENST00000412238 351 ntBASIC2.56□□□□□ -2
SYCE3A1L190 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.56□□□□□ -2
SYCE3A1L190 AL591212.2-201ENST00000433923 257 ntBASIC2.56□□□□□ -2
SYCE3A1L190 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.56□□□□□ -2
SYCE3A1L190 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.56□□□□□ -2
SYCE3A1L190 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.56□□□□□ -2
SYCE3A1L190 RNU6-717P-201ENST00000459076 104 ntBASIC2.56□□□□□ -2
SYCE3A1L190 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.56□□□□□ -2
SYCE3A1L190 RNU6-1129P-201ENST00000515964 104 ntBASIC2.56□□□□□ -2
SYCE3A1L190 RNU6-581P-201ENST00000516214 105 ntBASIC2.56□□□□□ -2
SYCE3A1L190 RNU6-914P-201ENST00000516749 109 ntBASIC2.56□□□□□ -2
SYCE3A1L190 AC011979.2-201ENST00000527568 352 ntBASIC2.56□□□□□ -2
SYCE3A1L190 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.56□□□□□ -2
SYCE3A1L190 MTND1P24-201ENST00000552175 861 ntBASIC2.56□□□□□ -2
SYCE3A1L190 EIF4BP1-201ENST00000554881 351 ntBASIC2.56□□□□□ -2
SYCE3A1L190 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.56□□□□□ -2
SYCE3A1L190 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.56□□□□□ -2
SYCE3A1L190 MIR5697-201ENST00000578045 78 ntBASIC2.56□□□□□ -2
SYCE3A1L190 AC046143.2-201ENST00000609789 160 ntBASIC2.56□□□□□ -2
SYCE3A1L190 TEX21P-201ENST00000447107 1476 ntBASIC2.56□□□□□ -2
SYCE3A1L190 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SYCE3A1L190 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
SYCE3A1L190 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.56□□□□□ -2
SYCE3A1L190 RNU6-946P-201ENST00000383878 107 ntBASIC2.55□□□□□ -2
SYCE3A1L190 MIR218-1-201ENST00000384999 110 ntBASIC2.55□□□□□ -2
SYCE3A1L190 U6atac.2-201ENST00000408644 118 ntBASIC2.55□□□□□ -2
SYCE3A1L190 Y_RNA.608-201ENST00000410647 95 ntBASIC2.55□□□□□ -2
SYCE3A1L190 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.55□□□□□ -2
SYCE3A1L190 AC011233.1-201ENST00000422812 283 ntBASIC2.55□□□□□ -2
SYCE3A1L190 RPL30P4-201ENST00000429309 333 ntBASIC2.55□□□□□ -2
SYCE3A1L190 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.55□□□□□ -2
SYCE3A1L190 FABP5P14-201ENST00000437273 393 ntBASIC2.55□□□□□ -2
SYCE3A1L190 RPL23AP7-203ENST00000449021 469 ntBASIC2.55□□□□□ -2
SYCE3A1L190 AL590365.1-201ENST00000450788 243 ntBASIC2.55□□□□□ -2
SYCE3A1L190 AC092001.1-201ENST00000453012 261 ntBASIC2.55□□□□□ -2
SYCE3A1L190 AL139824.2-201ENST00000458731 1095 ntBASIC2.55□□□□□ -2
SYCE3A1L190 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.55□□□□□ -2
SYCE3A1L190 AC109927.2-201ENST00000506416 303 ntBASIC2.55□□□□□ -2
SYCE3A1L190 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.55□□□□□ -2
SYCE3A1L190 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.55□□□□□ -2
SYCE3A1L190 RNU6-572P-201ENST00000516724 80 ntBASIC2.55□□□□□ -2
SYCE3A1L190 RNU6-677P-201ENST00000516914 101 ntBASIC2.55□□□□□ -2
SYCE3A1L190 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.55□□□□□ -2
SYCE3A1L190 AC021269.2-201ENST00000532318 330 ntBASIC2.55□□□□□ -2
SYCE3A1L190 LINC00933-203ENST00000559812 219 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms