Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 RN7SKP224-201ENST00000364140 325 ntBASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 U3.13-201ENST00000364804 214 ntBASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 RNA5SP151-201ENST00000365632 117 ntBASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 RNU6-378P-201ENST00000384324 107 ntBASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 Y_RNA.541-201ENST00000384640 113 ntBASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 MIR3065-201ENST00000390137 79 ntBASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 MRPL35P1-201ENST00000404272 572 ntBASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 MTND3P9-201ENST00000429526 346 ntBASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 HSPD1P21-201ENST00000436541 245 ntBASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 AC022795.1-201ENST00000473808 480 ntBASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 SNORA25.14-201ENST00000516481 132 ntBASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 RNU6-143P-201ENST00000516942 93 ntBASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 AF186190.1-201ENST00000517470 480 ntBASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 AC024405.2-202ENST00000532731 184 ntBASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 AP002392.1-201ENST00000537692 208 ntBASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 HMGB1P14-201ENST00000557424 591 ntBASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 BDH2P1-201ENST00000602288 736 ntBASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 AC073657.2-201ENST00000605661 303 ntBASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 AC034102.8-201ENST00000615146 484 ntBASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 MIR6891-201ENST00000618788 93 ntBASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 MIR4275-201ENST00000636486 87 ntBASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 AC027228.2-201ENST00000567141 2154 ntBASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 LINC02555-201ENST00000563933 1951 ntBASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 SNORD81.1-201ENST00000363064 77 ntBASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 RNU1-20P-201ENST00000363314 162 ntBASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 RNA5SP283-201ENST00000365604 119 ntBASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 PPIAP31-201ENST00000405422 495 ntBASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 AL096701.2-201ENST00000416920 238 ntBASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 AL136097.1-201ENST00000456945 913 ntBASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 U8.21-201ENST00000459536 136 ntBASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 APOOP4-201ENST00000513530 597 ntBASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 RNA5SP471-201ENST00000516971 106 ntBASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 AL442163.3-201ENST00000554110 156 ntBASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 AC103996.1-201ENST00000555468 102 ntBASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 TVP23BP1-201ENST00000557500 617 ntBASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 BPIFA4P-203ENST00000603168 689 ntBASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 AC079587.1-201ENST00000603846 277 ntBASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 MIR8076-201ENST00000611401 83 ntBASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 AC004852.3-201ENST00000614131 326 ntBASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 MIR8059-201ENST00000620427 81 ntBASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 AC034229.5-201ENST00000624258 185 ntBASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNX11Q9Y5W9 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SNX11Q9Y5W9 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SNX11Q9Y5W9 MAPK10-303ENST00000641324 3959 ntBASIC4.33□□□□□ -1.72
SNX11Q9Y5W9 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.33□□□□□ -1.72
SNX11Q9Y5W9 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SNX11Q9Y5W9 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
SNX11Q9Y5W9 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.33□□□□□ -1.72
SNX11Q9Y5W9 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SNX11Q9Y5W9 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SNX11Q9Y5W9 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SNX11Q9Y5W9 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SNX11Q9Y5W9 SNORD50.1-201ENST00000362987 71 ntBASIC4.33□□□□□ -1.72
SNX11Q9Y5W9 RNA5SP372-201ENST00000390836 115 ntBASIC4.33□□□□□ -1.72
SNX11Q9Y5W9 RNU6-882P-201ENST00000391025 103 ntBASIC4.33□□□□□ -1.72
SNX11Q9Y5W9 RPS29P13-201ENST00000402041 169 ntBASIC4.33□□□□□ -1.72
SNX11Q9Y5W9 RNU6-1140P-201ENST00000410517 106 ntBASIC4.33□□□□□ -1.72
SNX11Q9Y5W9 RN7SKP167-201ENST00000411047 285 ntBASIC4.33□□□□□ -1.72
SNX11Q9Y5W9 EIF4A1P3-201ENST00000411521 244 ntBASIC4.33□□□□□ -1.72
SNX11Q9Y5W9 COX6CP10-201ENST00000416832 224 ntBASIC4.33□□□□□ -1.72
SNX11Q9Y5W9 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.33□□□□□ -1.72
SNX11Q9Y5W9 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.33□□□□□ -1.72
SNX11Q9Y5W9 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.33□□□□□ -1.72
SNX11Q9Y5W9 NDUFB4P10-201ENST00000452541 359 ntBASIC4.33□□□□□ -1.72
SNX11Q9Y5W9 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.33□□□□□ -1.72
SNX11Q9Y5W9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.33□□□□□ -1.72
SNX11Q9Y5W9 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.33□□□□□ -1.72
SNX11Q9Y5W9 RNA5SP446-201ENST00000515955 82 ntBASIC4.33□□□□□ -1.72
SNX11Q9Y5W9 RNA5SP497-201ENST00000516081 97 ntBASIC4.33□□□□□ -1.72
SNX11Q9Y5W9 RN7SKP234-201ENST00000517173 224 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms