Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 AC093010.3-201ENST00000570269 15214 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 MTND5P1-201ENST00000445440 1375 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 RNU4-66P-201ENST00000365199 138 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 SNORD115-7-201ENST00000365306 82 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 Y_RNA.378-201ENST00000365652 113 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 RNU6-637P-201ENST00000384050 107 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 MIR135A2-201ENST00000384854 100 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 RNU6-754P-201ENST00000391166 107 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 RNU6-510P-201ENST00000391239 108 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 RPL21P3-201ENST00000395517 478 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 RPL21P17-201ENST00000397467 475 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 NDUFB4P4-201ENST00000404822 243 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 RNU4-14P-201ENST00000410858 122 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 RPL21P66-201ENST00000426566 466 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 AC146507.2-201ENST00000460608 476 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 AC007547.1-201ENST00000462177 490 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 RPS15AP36-201ENST00000492022 382 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 AC117522.3-201ENST00000507974 584 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 HMGN1P11-201ENST00000508668 303 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 AC098591.2-201ENST00000510152 315 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 SNORA19.2-201ENST00000516013 114 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 RNU1-61P-201ENST00000516107 151 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 SCARNA14-201ENST00000516903 136 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 RNA5SP503-201ENST00000517047 117 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 AP004371.1-201ENST00000525240 214 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 MIR4298-201ENST00000584380 73 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 MIR3942-201ENST00000585264 109 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 POLR3GP2-201ENST00000588366 668 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 RNU1-30P-201ENST00000606575 163 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 AL390240.1-201ENST00000612950 384 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 AC093838.1-201ENST00000613014 469 ntBASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHGB1Q9Y5G3 AF117829.1-206ENST00000621883 3802 ntBASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 AC004925.1-201ENST00000624256 2706 ntBASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 Y_RNA.301-201ENST00000364990 103 ntBASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 RNU6-432P-201ENST00000384196 109 ntBASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 U8.11-201ENST00000384699 133 ntBASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 U8.12-201ENST00000384701 133 ntBASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 Y_RNA.576-201ENST00000384781 102 ntBASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 RNU6-278P-201ENST00000390945 109 ntBASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 AL109755.1-201ENST00000401791 649 ntBASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 TXNP7-201ENST00000406296 293 ntBASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 MIR1302-11-201ENST00000408051 138 ntBASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 MIR1302-9-201ENST00000408365 138 ntBASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 MIR1302-10-201ENST00000408734 138 ntBASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 RNU2-29P-201ENST00000410423 189 ntBASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 RNU4-65P-201ENST00000410473 140 ntBASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 RNU4-78P-201ENST00000410940 126 ntBASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 AC009161.1-201ENST00000417306 376 ntBASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 U8.18-201ENST00000459285 133 ntBASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 RPL21P8-201ENST00000465083 535 ntBASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 AC083904.1-201ENST00000487828 231 ntBASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 RNU6-1092P-201ENST00000516955 87 ntBASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 MIR1302-2-201ENST00000607096 138 ntBASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 U3.45-201ENST00000607547 219 ntBASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 AC104237.2-201ENST00000612456 443 ntBASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 AC025034.2-201ENST00000623264 286 ntBASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.16□□□□□ -1.9
PCDHGB1Q9Y5G3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.15□□□□□ -1.9
PCDHGB1Q9Y5G3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.15□□□□□ -1.9
PCDHGB1Q9Y5G3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PCDHGB1Q9Y5G3 AC008264.2-201ENST00000610193 3731 ntBASIC3.15□□□□□ -1.9
PCDHGB1Q9Y5G3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms