Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 RPL23AP84-201ENST00000571193 464 ntBASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 FAM60BP-201ENST00000578364 658 ntBASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 MIR4738-201ENST00000579134 87 ntBASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 AC243960.4-201ENST00000600532 288 ntBASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 AC006557.5-201ENST00000603126 811 ntBASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 AL121757.2-201ENST00000611223 313 ntBASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 AL079305.1-201ENST00000623159 3008 ntBASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 SDAD1P2-201ENST00000441308 2028 ntBASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 PWAR6-201ENST00000552334 4618 ntBASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 MFSD8-236ENST00000641509 4050 ntBASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 RNU6-82P-201ENST00000363970 107 ntBASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 RNU6-522P-201ENST00000364497 107 ntBASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 SNORA36C-201ENST00000384289 132 ntBASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 Y_RNA.530-201ENST00000384587 101 ntBASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 NDUFB4P4-201ENST00000404822 243 ntBASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 RNU6-1148P-201ENST00000410992 104 ntBASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 AL353678.1-201ENST00000422735 741 ntBASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 RNU6-953P-201ENST00000459154 107 ntBASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 AC008155.2-201ENST00000464337 397 ntBASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 AC010285.1-201ENST00000470580 392 ntBASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 AC025518.1-201ENST00000479856 347 ntBASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 RBBP4P6-201ENST00000508098 202 ntBASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 RNU4-49P-201ENST00000516080 140 ntBASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 Y_RNA.665-201ENST00000516177 98 ntBASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 RNU6-677P-201ENST00000516914 101 ntBASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 AC067852.3-201ENST00000589177 561 ntBASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 AL138889.2-201ENST00000603883 242 ntBASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 AL353621.2-201ENST00000605340 133 ntBASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 AL132765.2-201ENST00000610812 351 ntBASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 AL359547.2-201ENST00000615810 418 ntBASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 AC005858.4-201ENST00000623191 700 ntBASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
SSX2IPQ9Y2D8 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 RNU6-1181P-201ENST00000384191 106 ntBASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 MIR634-201ENST00000385208 97 ntBASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 SNORD17-201ENST00000390930 237 ntBASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 RNU6-817P-201ENST00000391083 104 ntBASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 UBE2V1P2-201ENST00000397758 440 ntBASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 AL122016.1-201ENST00000403365 367 ntBASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 AC079780.1-201ENST00000428259 207 ntBASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 RPS24P6-201ENST00000452670 400 ntBASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 RNU6-329P-201ENST00000459618 107 ntBASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 HSPE1P6-201ENST00000479457 291 ntBASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 Y_RNA.654-201ENST00000497848 106 ntBASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 FAM206BP-201ENST00000510179 541 ntBASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 AC112206.3-201ENST00000514578 389 ntBASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 SNORA19.2-201ENST00000516013 114 ntBASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 RNU6-123P-201ENST00000516163 102 ntBASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 AC105029.1-201ENST00000520250 669 ntBASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 RPL7P20-201ENST00000520308 745 ntBASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 AC109635.4-202ENST00000531666 412 ntBASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 CBX3P7-201ENST00000532876 502 ntBASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 AC116096.1-201ENST00000566804 2314 ntBASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 MIR4742-201ENST00000581069 85 ntBASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 AL670379.4-201ENST00000605279 254 ntBASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 AC005000.2-201ENST00000605468 310 ntBASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 AL022345.1-201ENST00000607292 135 ntBASIC3.74□□□□□ -1.81
SSX2IPQ9Y2D8 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms