Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 DNAJC19P2-201ENST00000593340 302 ntBASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 AL133393.1-201ENST00000603277 287 ntBASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 AL158032.1-201ENST00000605401 106 ntBASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 SNORD113-5-201ENST00000607261 78 ntBASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 SNORD91B-202ENST00000608459 222 ntBASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 AC034229.5-201ENST00000624258 185 ntBASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.9□□□□□ -1.46
PDZRN3Q9UPQ7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PDZRN3Q9UPQ7 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PDZRN3Q9UPQ7 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PDZRN3Q9UPQ7 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.9□□□□□ -1.47
PDZRN3Q9UPQ7 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PDZRN3Q9UPQ7 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.9□□□□□ -1.47
PDZRN3Q9UPQ7 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 RNU6-653P-201ENST00000363074 106 ntBASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 Y_RNA.480-201ENST00000384364 102 ntBASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 MIR190B-201ENST00000401119 79 ntBASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 Z98745.1-201ENST00000402553 494 ntBASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 AC099336.2-201ENST00000422457 254 ntBASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 TRBV26-201ENST00000456572 344 ntBASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 AC099560.2-201ENST00000457554 255 ntBASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 AC016065.2-201ENST00000514530 444 ntBASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 RNU5E-3P-201ENST00000515913 68 ntBASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 RNU7-121P-201ENST00000516604 62 ntBASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 OR14L1P-202ENST00000641545 3009 ntBASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDZRN3Q9UPQ7 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDZRN3Q9UPQ7 IQCB2P-201ENST00000401788 1633 ntBASIC5.88□□□□□ -1.47
PDZRN3Q9UPQ7 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
PDZRN3Q9UPQ7 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDZRN3Q9UPQ7 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.88□□□□□ -1.47
PDZRN3Q9UPQ7 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDZRN3Q9UPQ7 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PDZRN3Q9UPQ7 SNORA12.1-201ENST00000390873 148 ntBASIC5.88□□□□□ -1.47
PDZRN3Q9UPQ7 RPL23AP26-201ENST00000412728 464 ntBASIC5.88□□□□□ -1.47
PDZRN3Q9UPQ7 TMSB10P2-201ENST00000416049 131 ntBASIC5.88□□□□□ -1.47
PDZRN3Q9UPQ7 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.88□□□□□ -1.47
PDZRN3Q9UPQ7 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.88□□□□□ -1.47
PDZRN3Q9UPQ7 RN7SL432P-201ENST00000484057 298 ntBASIC5.88□□□□□ -1.47
PDZRN3Q9UPQ7 AC069113.1-201ENST00000517763 267 ntBASIC5.88□□□□□ -1.47
PDZRN3Q9UPQ7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC5.88□□□□□ -1.47
PDZRN3Q9UPQ7 AC105129.1-201ENST00000560250 297 ntBASIC5.88□□□□□ -1.47
PDZRN3Q9UPQ7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC5.88□□□□□ -1.47
PDZRN3Q9UPQ7 AC067852.4-201ENST00000590314 478 ntBASIC5.88□□□□□ -1.47
PDZRN3Q9UPQ7 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.88□□□□□ -1.47
PDZRN3Q9UPQ7 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.88□□□□□ -1.47
PDZRN3Q9UPQ7 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PDZRN3Q9UPQ7 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
PDZRN3Q9UPQ7 AC026523.2-201ENST00000625039 7739 ntBASIC5.88□□□□□ -1.47
PDZRN3Q9UPQ7 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC5.88□□□□□ -1.47
PDZRN3Q9UPQ7 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 RNU4-11P-201ENST00000365287 132 ntBASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 RNU6-239P-201ENST00000390990 99 ntBASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 Z74021.1-201ENST00000423610 407 ntBASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 AC092573.2-201ENST00000434546 243 ntBASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 PTMAP3-201ENST00000447474 330 ntBASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 RPS11P1-201ENST00000451072 473 ntBASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 U8.22-201ENST00000459141 133 ntBASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 RPS27AP9-201ENST00000477681 438 ntBASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 RPL31P60-201ENST00000478450 367 ntBASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 RN7SL810P-201ENST00000493031 276 ntBASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 AC026402.1-201ENST00000513642 170 ntBASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 RNU6-65P-201ENST00000516332 98 ntBASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 AC123786.2-201ENST00000603459 275 ntBASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 AL589994.2-201ENST00000621124 579 ntBASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 snoZ196.1-201ENST00000625269 89 ntBASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 U3.53-201ENST00000628922 216 ntBASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 AL031119.1-201ENST00000404707 1879 ntBASIC5.87□□□□□ -1.47
PDZRN3Q9UPQ7 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms