Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 SNORA70.16-201ENST00000516390 95 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 IGKV2-23-201ENST00000518729 323 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 HSBP1P1-201ENST00000555205 166 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 MIR5696-201ENST00000578474 85 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 MIR5701-3-201ENST00000578890 82 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 MIR5188-201ENST00000583467 113 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 MIR5701-1-201ENST00000585138 82 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 HMGB1P50-201ENST00000605814 607 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-6P-201ENST00000606623 107 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 MIR3976-201ENST00000606807 139 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 AP002826.1-201ENST00000608835 315 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 MIR5701-2-201ENST00000615634 82 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 AC005086.4-201ENST00000623065 213 ntBASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDC42EP3Q9UKI2 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.78□□□□□ -1.81
CDC42EP3Q9UKI2 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 AC068254.2-201ENST00000623938 3577 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 AC007685.1-201ENST00000329806 452 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 RPL9P7-201ENST00000330965 580 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 RNU6-238P-201ENST00000363313 106 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 RNU1-20P-201ENST00000363314 162 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 Y_RNA.152-201ENST00000363578 100 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 U3.15-201ENST00000365398 212 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 RNU6-741P-201ENST00000383889 107 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 RNU6-933P-201ENST00000384424 107 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 SNORA40C-201ENST00000391285 128 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 U3.42-201ENST00000408746 214 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 AL353997.1-201ENST00000432936 108 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 AC092573.2-201ENST00000434546 243 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 AL513043.1-201ENST00000439124 535 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 AC013470.1-201ENST00000453438 462 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 RPL9P9-202ENST00000466501 579 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 RNU7-4P-201ENST00000516961 62 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 RNU6-1271P-201ENST00000517049 105 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 RNA5SP290-201ENST00000517133 127 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 AP003730.1-201ENST00000524605 285 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 AC069240.1-201ENST00000548774 375 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 MTND6P33-201ENST00000571794 183 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 AL158827.2-201ENST00000602494 330 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 AL645944.1-201ENST00000603857 493 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 AC100812.1-201ENST00000607622 580 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 AC006133.1-201ENST00000617106 264 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 AL691447.3-201ENST00000635020 330 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 MTND5P27-201ENST00000428871 1720 ntBASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDC42EP3Q9UKI2 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 RNU6-1317P-201ENST00000364582 104 ntBASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 RNA5SP513-201ENST00000364648 118 ntBASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 Y_RNA.276-201ENST00000364732 109 ntBASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 RNA5SP366-201ENST00000365454 123 ntBASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 Y_RNA.476-201ENST00000384347 108 ntBASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 RPL21P1-201ENST00000399532 476 ntBASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 RNU6-847P-201ENST00000411115 108 ntBASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 EIF4EP2-201ENST00000422816 654 ntBASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 AL645608.4-201ENST00000423619 154 ntBASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 RPS15AP10-201ENST00000432472 382 ntBASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 AC004938.1-201ENST00000438468 308 ntBASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 HIGD1AP2-201ENST00000446367 280 ntBASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 AL583843.1-201ENST00000456070 346 ntBASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 RN7SL98P-201ENST00000462271 300 ntBASIC3.76□□□□□ -1.81
CDC42EP3Q9UKI2 AC133134.1-201ENST00000466800 359 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms