Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 AC104623.2-202ENST00000623477 4002 ntBASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 AC083843.3-201ENST00000623679 2186 ntBASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 Y_RNA.270-201ENST00000364693 104 ntBASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 RNU6-937P-201ENST00000384325 106 ntBASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 MIR32-201ENST00000384965 70 ntBASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 Y_RNA.602-201ENST00000410535 92 ntBASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 TMSB10P2-201ENST00000416049 131 ntBASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 RPL23AP95-201ENST00000426806 265 ntBASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 RN7SL860P-201ENST00000473738 223 ntBASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 RPL30P1-201ENST00000488676 339 ntBASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 RN7SL346P-201ENST00000491561 294 ntBASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 HMGB3P16-201ENST00000508037 287 ntBASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 AC005255.1-201ENST00000593748 216 ntBASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 AC012468.1-201ENST00000604888 430 ntBASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 BX005214.3-202ENST00000619809 325 ntBASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 AC073869.10-201ENST00000642016 354 ntBASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 OR56B2P-202ENST00000641377 2453 ntBASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.47□□□□□ -1.69
FOXD3Q9UJU5 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
FOXD3Q9UJU5 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.46□□□□□ -1.69
FOXD3Q9UJU5 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.46□□□□□ -1.69
FOXD3Q9UJU5 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.46□□□□□ -1.69
FOXD3Q9UJU5 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 RNU6-50P-201ENST00000362356 103 ntBASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 RNU6-137P-201ENST00000363680 108 ntBASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 Y_RNA.269-201ENST00000364685 89 ntBASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 AL033519.2-201ENST00000403958 392 ntBASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 AC007738.1-201ENST00000413892 348 ntBASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 AL732292.1-201ENST00000426692 226 ntBASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 AL450023.3-201ENST00000440592 271 ntBASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 RPL34P20-201ENST00000442771 351 ntBASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 AL031659.1-201ENST00000447075 539 ntBASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 HMGB3P8-201ENST00000449709 577 ntBASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 RPS17P2-201ENST00000461663 408 ntBASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 AP000873.1-201ENST00000463987 400 ntBASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 AC087477.1-201ENST00000465747 340 ntBASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 RN7SL738P-201ENST00000470264 297 ntBASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 AC026784.1-201ENST00000507986 352 ntBASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 AC093840.1-201ENST00000511599 336 ntBASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 AC108043.1-201ENST00000512696 574 ntBASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 RNU6-406P-201ENST00000516470 107 ntBASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 CR383656.8-201ENST00000549046 145 ntBASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 MIR3667-201ENST00000581025 74 ntBASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 AC127459.3-201ENST00000624328 466 ntBASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 FAM35BP-202ENST00000497389 3337 ntBASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
FOXD3Q9UJU5 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 RNU6-600P-201ENST00000362524 99 ntBASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 SNORA31-201ENST00000362607 130 ntBASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 RNVU1-6-201ENST00000364688 164 ntBASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 SNORD32A-201ENST00000364805 84 ntBASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 SNORA56-201ENST00000383966 129 ntBASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 MIR1298-201ENST00000408783 112 ntBASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 NDUFS5P4-201ENST00000412983 318 ntBASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 AC011742.1-201ENST00000431448 434 ntBASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 AC007389.2-201ENST00000434630 306 ntBASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 AF186996.7-201ENST00000492781 209 ntBASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 AC073073.1-201ENST00000493920 463 ntBASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 AC097462.2-201ENST00000504623 481 ntBASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 RNA5SP43-201ENST00000516559 110 ntBASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 RNU6-789P-201ENST00000517105 102 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms