Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AK3P2-201ENST00000507976 429 ntBASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 MIR3936-201ENST00000584304 110 ntBASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 FAM25E-202ENST00000608562 189 ntBASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 AL022322.2-201ENST00000624072 20397 ntBASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 AL133412.1-201ENST00000380194 2992 ntBASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CUEDC1Q9NWM3 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 Y_RNA.33-201ENST00000362591 102 ntBASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 RNU6-926P-201ENST00000384075 107 ntBASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 RPS4XP3-201ENST00000398541 413 ntBASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 U3.36-201ENST00000408418 213 ntBASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 RNA5SP129-201ENST00000410276 118 ntBASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 RNU2-52P-201ENST00000410680 190 ntBASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 AP000907.1-201ENST00000428428 510 ntBASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 AC091390.1-201ENST00000433904 331 ntBASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 RPS29P10-201ENST00000439197 166 ntBASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 TOMM22P6-201ENST00000465035 409 ntBASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 RN7SL481P-201ENST00000477764 299 ntBASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 AC024940.3-201ENST00000538551 316 ntBASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 MIR4472-2-201ENST00000582069 67 ntBASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 AC060766.3-201ENST00000591442 263 ntBASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 MIR378J-201ENST00000611988 109 ntBASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 AL109809.4-201ENST00000603520 2185 ntBASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CUEDC1Q9NWM3 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CUEDC1Q9NWM3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5□□□□□ -1.61
CUEDC1Q9NWM3 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CUEDC1Q9NWM3 MIR412-201ENST00000362142 91 ntBASIC5□□□□□ -1.61
CUEDC1Q9NWM3 RNU6-653P-201ENST00000363074 106 ntBASIC5□□□□□ -1.61
CUEDC1Q9NWM3 RNU6-384P-201ENST00000364900 104 ntBASIC5□□□□□ -1.61
CUEDC1Q9NWM3 Y_RNA.446-201ENST00000384178 104 ntBASIC5□□□□□ -1.61
CUEDC1Q9NWM3 RNU6-318P-201ENST00000384283 103 ntBASIC5□□□□□ -1.61
CUEDC1Q9NWM3 MIR600-201ENST00000385007 98 ntBASIC5□□□□□ -1.61
CUEDC1Q9NWM3 SNORA48.4-201ENST00000391089 134 ntBASIC5□□□□□ -1.61
CUEDC1Q9NWM3 MIR1290-201ENST00000408735 78 ntBASIC5□□□□□ -1.61
CUEDC1Q9NWM3 AL592045.1-201ENST00000429867 352 ntBASIC5□□□□□ -1.61
CUEDC1Q9NWM3 HSPD1P21-201ENST00000436541 245 ntBASIC5□□□□□ -1.61
CUEDC1Q9NWM3 RPS15AP7-201ENST00000439294 405 ntBASIC5□□□□□ -1.61
CUEDC1Q9NWM3 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5□□□□□ -1.61
CUEDC1Q9NWM3 AL137159.1-201ENST00000452808 512 ntBASIC5□□□□□ -1.61
CUEDC1Q9NWM3 AC079168.2-201ENST00000453977 416 ntBASIC5□□□□□ -1.61
CUEDC1Q9NWM3 AC087588.1-201ENST00000462203 316 ntBASIC5□□□□□ -1.61
CUEDC1Q9NWM3 RN7SL738P-201ENST00000470264 297 ntBASIC5□□□□□ -1.61
CUEDC1Q9NWM3 AC097462.2-201ENST00000504623 481 ntBASIC5□□□□□ -1.61
CUEDC1Q9NWM3 RNU6-927P-201ENST00000516199 100 ntBASIC5□□□□□ -1.61
CUEDC1Q9NWM3 AC027369.5-201ENST00000533838 755 ntBASIC5□□□□□ -1.61
CUEDC1Q9NWM3 MIR3921-201ENST00000577308 85 ntBASIC5□□□□□ -1.61
CUEDC1Q9NWM3 MIR548X2-201ENST00000579776 100 ntBASIC5□□□□□ -1.61
CUEDC1Q9NWM3 AC008749.1-201ENST00000597650 306 ntBASIC5□□□□□ -1.61
CUEDC1Q9NWM3 RPL23AP88-201ENST00000605759 454 ntBASIC5□□□□□ -1.61
CUEDC1Q9NWM3 AC005046.1-201ENST00000608515 625 ntBASIC5□□□□□ -1.61
CUEDC1Q9NWM3 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CUEDC1Q9NWM3 AC091953.3-201ENST00000623220 236 ntBASIC5□□□□□ -1.61
CUEDC1Q9NWM3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC5□□□□□ -1.61
CUEDC1Q9NWM3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
CUEDC1Q9NWM3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
CUEDC1Q9NWM3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CUEDC1Q9NWM3 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CUEDC1Q9NWM3 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CUEDC1Q9NWM3 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CUEDC1Q9NWM3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CUEDC1Q9NWM3 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.99□□□□□ -1.61
CUEDC1Q9NWM3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CUEDC1Q9NWM3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
CUEDC1Q9NWM3 Y_RNA.71-201ENST00000362892 104 ntBASIC4.99□□□□□ -1.61
CUEDC1Q9NWM3 Y_RNA.123-201ENST00000363338 102 ntBASIC4.99□□□□□ -1.61
CUEDC1Q9NWM3 Y_RNA.217-201ENST00000364214 105 ntBASIC4.99□□□□□ -1.61
CUEDC1Q9NWM3 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CUEDC1Q9NWM3 Y_RNA.570-201ENST00000384750 101 ntBASIC4.99□□□□□ -1.61
CUEDC1Q9NWM3 MIR186-201ENST00000384988 86 ntBASIC4.99□□□□□ -1.61
CUEDC1Q9NWM3 MIR708-201ENST00000390708 88 ntBASIC4.99□□□□□ -1.61
CUEDC1Q9NWM3 MIR1182-201ENST00000408363 97 ntBASIC4.99□□□□□ -1.61
CUEDC1Q9NWM3 NUTF2P7-201ENST00000453086 375 ntBASIC4.99□□□□□ -1.61
CUEDC1Q9NWM3 Y_RNA.641-201ENST00000459414 105 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms