Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC091826.1-201ENST00000514065 313 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 SNORA31.19-201ENST00000517079 126 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 AC068587.5-201ENST00000528506 175 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 AL121821.2-201ENST00000556081 394 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 AC073544.2-201ENST00000601155 540 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 AL022154.1-201ENST00000604698 785 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 AC064872.1-201ENST00000604823 1072 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 AL158032.1-201ENST00000605401 106 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 AC087752.4-201ENST00000605911 462 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 OR2AS2P-201ENST00000606902 342 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 AC093732.2-201ENST00000607950 274 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 AC024940.5-201ENST00000622889 474 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 MIR7515-201ENST00000637837 67 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 AC004520.1-201ENST00000608362 1413 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 MTND5P17-201ENST00000418405 1603 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 Y_RNA.22-201ENST00000362492 102 ntBASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 Y_RNA.77-201ENST00000362962 107 ntBASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 RNU6-108P-201ENST00000365558 107 ntBASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 RNU6-297P-201ENST00000384636 107 ntBASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 RNU6-19P-201ENST00000384718 107 ntBASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 SNORA40C-201ENST00000391285 128 ntBASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 RNA5SP492-201ENST00000411330 114 ntBASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 PTGES3P4-201ENST00000426243 356 ntBASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 AC007560.1-201ENST00000426912 237 ntBASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 AC092427.1-202ENST00000430569 476 ntBASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 AL353706.1-201ENST00000436728 494 ntBASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 MTND2P4-201ENST00000445034 1004 ntBASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 BTF3P15-201ENST00000455606 336 ntBASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 AC022364.2-201ENST00000457963 554 ntBASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 SCARNA24.1-201ENST00000516465 137 ntBASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 AC090572.1-201ENST00000519251 160 ntBASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 RANP3-201ENST00000530970 276 ntBASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 AP000873.5-201ENST00000533906 236 ntBASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 AC068790.2-201ENST00000602601 557 ntBASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 MIR98-201ENST00000606724 119 ntBASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 AL589743.7-201ENST00000612637 233 ntBASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 uc_338.14-201ENST00000613162 166 ntBASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 MIR6134-201ENST00000617606 109 ntBASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.14□□□□□ -1.91
BLOC1S4Q9NUP1 MTND5P30-201ENST00000452896 1731 ntBASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 SNORA51.4-201ENST00000364993 124 ntBASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 SNORA24.1-201ENST00000384401 135 ntBASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 AL592148.1-201ENST00000413568 445 ntBASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 AC114491.1-201ENST00000416095 246 ntBASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 PIGFP2-201ENST00000421400 651 ntBASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 AC244505.5-201ENST00000443639 207 ntBASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 RPL31P3-201ENST00000458430 332 ntBASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 RNU6-956P-201ENST00000458868 103 ntBASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 AC107626.1-201ENST00000471084 183 ntBASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 RNU6-123P-201ENST00000516163 102 ntBASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 RN7SKP40-201ENST00000517211 242 ntBASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 AC079600.2-201ENST00000550076 130 ntBASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 TRAV37-201ENST00000553906 342 ntBASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 AC098848.2-201ENST00000588023 330 ntBASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 OR1M4P-201ENST00000589199 287 ntBASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 AC005046.1-201ENST00000608515 625 ntBASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 U6.42-201ENST00000618440 107 ntBASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 AC025034.2-201ENST00000623264 286 ntBASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms