Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AC092798.1-201ENST00000458542 409 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 RPS27P29-201ENST00000463110 252 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 AC139453.3-201ENST00000493276 369 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 RNU6-1281P-201ENST00000516223 105 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 Y_RNA.704-201ENST00000516851 102 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 RNU6-835P-201ENST00000516974 104 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 MTND1P5-201ENST00000517906 940 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 AC009902.1-201ENST00000519351 183 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 OR5B10P-201ENST00000532869 642 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 HIF1AP1-201ENST00000553642 175 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 H3F3AP1-201ENST00000559984 334 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 MTCO3P24-201ENST00000572729 782 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 AL162413.1-201ENST00000603198 110 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 AC019176.2-201ENST00000611579 315 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 AC084757.4-201ENST00000616350 526 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 AC091903.1-201ENST00000624322 454 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 MIR1321-201ENST00000637766 79 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 HSPA8P4-201ENST00000511877 1920 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 MAPK10-362ENST00000641864 4484 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 RNU4-12P-201ENST00000365233 139 ntBASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 RNU1-73P-201ENST00000383971 164 ntBASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 Y_RNA.402-201ENST00000383972 102 ntBASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 Y_RNA.450-201ENST00000384198 113 ntBASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 AL139039.1-201ENST00000401900 692 ntBASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 NDUFS5P4-201ENST00000412983 318 ntBASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 SKA2P1-201ENST00000425592 390 ntBASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 BRK1P2-201ENST00000442875 223 ntBASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 MTATP6P7-201ENST00000453315 681 ntBASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 SNRPFP3-201ENST00000457792 225 ntBASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 RPL21P41-201ENST00000459863 264 ntBASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 AC093663.1-201ENST00000497190 394 ntBASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 AC011352.1-201ENST00000512300 793 ntBASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 RNU1-103P-201ENST00000516502 125 ntBASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 RNU6-703P-201ENST00000516946 107 ntBASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 AC109635.3-201ENST00000529536 185 ntBASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 AC007458.1-201ENST00000542812 373 ntBASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 AC012468.1-201ENST00000604888 430 ntBASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 AC007938.3-201ENST00000604965 623 ntBASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 U3.45-201ENST00000607547 219 ntBASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 AC004832.5-201ENST00000608677 401 ntBASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 AC092794.1-201ENST00000612734 582 ntBASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 AL354685.2-201ENST00000448218 1447 ntBASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SLC6A13Q9NSD5 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 AC093908.1-201ENST00000623125 8092 ntBASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 U3.6-201ENST00000363622 211 ntBASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 RNY4P14-201ENST00000363656 96 ntBASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 USP9YP27-201ENST00000418455 438 ntBASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 AC098614.2-201ENST00000426040 255 ntBASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 HMGB1P9-201ENST00000429856 646 ntBASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 MYL8P-204ENST00000431574 518 ntBASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 HMGN2P31-201ENST00000432430 273 ntBASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 SEPT14P3-201ENST00000439401 183 ntBASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 AL732372.2-207ENST00000445840 183 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms