Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 MTCYBP43-201ENST00000513621 740 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 MTCO3P27-201ENST00000514397 196 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 RNU6-572P-201ENST00000516724 80 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 RNU6-64P-201ENST00000517119 105 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 AP003355.1-201ENST00000518956 587 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 RRN3P3-201ENST00000549207 578 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 AL670379.6-201ENST00000603753 252 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 AL670379.11-201ENST00000604059 253 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 AC008162.1-201ENST00000604718 254 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 AL670379.1-201ENST00000604752 252 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 AL670379.2-201ENST00000604983 252 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 AL670379.5-201ENST00000605253 252 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 AL670379.4-201ENST00000605279 254 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 AL670379.12-201ENST00000605291 253 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 AL670379.8-201ENST00000605353 252 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 AL670379.7-201ENST00000605823 252 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 AC068944.2-201ENST00000610373 403 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 MIR6889-201ENST00000613185 59 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 AL512506.1-201ENST00000613918 449 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 MIR6778-201ENST00000617912 73 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 AL158163.2-201ENST00000619110 700 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 U1.36-201ENST00000620684 176 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 MIR7703-201ENST00000620784 77 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 AC112204.3-201ENST00000623822 332 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 TEX21P-201ENST00000447107 1476 ntBASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
CDC42SE1Q9NRR8 PAPPA-AS1-201ENST00000445861 2450 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 AC091812.1-201ENST00000432235 1948 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 RNU1-58P-201ENST00000362413 163 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 RNU5E-1-201ENST00000362477 120 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 RNU6-1010P-201ENST00000362757 107 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 RNU6-1274P-201ENST00000384557 107 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 MIR320A-201ENST00000385302 82 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 RN7SKP284-201ENST00000411002 343 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 EEF1A1P41-201ENST00000414667 207 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 CHEK2P5-201ENST00000423877 246 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 AL592045.1-201ENST00000429867 352 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 VN1R108P-201ENST00000431580 830 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 AC015922.2-201ENST00000435593 184 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 AL772161.1-201ENST00000439130 476 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 RNU7-59P-201ENST00000459101 61 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 AC005908.1-201ENST00000468701 347 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 RPS3AP22-201ENST00000488297 769 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 PTP4A1P4-201ENST00000512479 322 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 RNA5SP320-201ENST00000516263 124 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 AP003392.2-201ENST00000527269 208 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 AC135279.1-201ENST00000543493 504 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 AC009097.3-201ENST00000563557 1018 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 AL512347.1-201ENST00000566420 503 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 MIR5089-201ENST00000580047 84 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 AC103710.2-201ENST00000609912 942 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 RMST_6.1-201ENST00000611980 203 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 AP003485.1-201ENST00000625093 753 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 AL034408.1-202ENST00000636088 415 ntBASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.84□□□□□ -2.27
CDC42SE1Q9NRR8 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 RNU6-661P-201ENST00000362409 107 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 SNORD114-19-201ENST00000363072 75 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 RNU6-1284P-201ENST00000363701 100 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 RNU6-853P-201ENST00000364306 107 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 RNU6-621P-201ENST00000364752 109 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 RNU6-439P-201ENST00000384188 106 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 RNU6-166P-201ENST00000384371 107 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 MIR186-201ENST00000384988 86 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 SNORA48.1-201ENST00000390879 135 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 SNORA40C-201ENST00000391285 128 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms