Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.65□□□□□ -2.31
CDC42SE2Q9NRR3 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
CDC42SE2Q9NRR3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 MIR29C-201ENST00000385231 88 ntBASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 MIR764-201ENST00000390811 85 ntBASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 PIGPP2-201ENST00000411569 458 ntBASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 AP1B1P2-201ENST00000416196 106 ntBASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 AC018630.2-202ENST00000422992 927 ntBASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 PNRC2P1-201ENST00000423940 420 ntBASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 AC108667.1-201ENST00000428618 249 ntBASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 USP9YP24-201ENST00000434374 697 ntBASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 MTCO2P20-201ENST00000437339 673 ntBASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 SMURF2P1-201ENST00000514992 481 ntBASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 RNU6-491P-201ENST00000516099 110 ntBASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 AP003034.1-201ENST00000534621 422 ntBASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 NDUFA5P6-201ENST00000542110 379 ntBASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 AC021739.1-201ENST00000559631 174 ntBASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 AC009268.1-201ENST00000561352 1203 ntBASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 STMN1P1-201ENST00000617809 440 ntBASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 AL121890.5-201ENST00000620848 304 ntBASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.64□□□□□ -2.31
CDC42SE2Q9NRR3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
CDC42SE2Q9NRR3 RNU6-1222P-201ENST00000384615 107 ntBASIC0.63□□□□□ -2.31
CDC42SE2Q9NRR3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
CDC42SE2Q9NRR3 RNU2-47P-201ENST00000410649 186 ntBASIC0.63□□□□□ -2.31
CDC42SE2Q9NRR3 AC004965.1-201ENST00000413033 213 ntBASIC0.63□□□□□ -2.31
CDC42SE2Q9NRR3 BTF3P4-201ENST00000418852 495 ntBASIC0.63□□□□□ -2.31
CDC42SE2Q9NRR3 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.63□□□□□ -2.31
CDC42SE2Q9NRR3 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC0.63□□□□□ -2.31
CDC42SE2Q9NRR3 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC0.63□□□□□ -2.31
CDC42SE2Q9NRR3 ZYG11AP1-201ENST00000430329 837 ntBASIC0.63□□□□□ -2.31
CDC42SE2Q9NRR3 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.63□□□□□ -2.31
CDC42SE2Q9NRR3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.63□□□□□ -2.31
CDC42SE2Q9NRR3 FCF1P6-201ENST00000456841 595 ntBASIC0.63□□□□□ -2.31
CDC42SE2Q9NRR3 snoU13.23-201ENST00000458863 104 ntBASIC0.63□□□□□ -2.31
CDC42SE2Q9NRR3 RPS15AP17-201ENST00000470598 390 ntBASIC0.63□□□□□ -2.31
CDC42SE2Q9NRR3 AL121594.1-201ENST00000475906 575 ntBASIC0.63□□□□□ -2.31
CDC42SE2Q9NRR3 RPL22P13-201ENST00000493291 347 ntBASIC0.63□□□□□ -2.31
CDC42SE2Q9NRR3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.63□□□□□ -2.31
CDC42SE2Q9NRR3 MTCYBP16-201ENST00000509187 1129 ntBASIC0.63□□□□□ -2.31
CDC42SE2Q9NRR3 SNORA48.11-201ENST00000517015 89 ntBASIC0.63□□□□□ -2.31
CDC42SE2Q9NRR3 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.63□□□□□ -2.31
CDC42SE2Q9NRR3 AP003122.4-201ENST00000530980 758 ntBASIC0.63□□□□□ -2.31
CDC42SE2Q9NRR3 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC0.63□□□□□ -2.31
CDC42SE2Q9NRR3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CDC42SE2Q9NRR3 TUG1_1.1-201ENST00000610654 145 ntBASIC0.63□□□□□ -2.31
CDC42SE2Q9NRR3 AL353997.5-201ENST00000618886 171 ntBASIC0.63□□□□□ -2.31
CDC42SE2Q9NRR3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.63□□□□□ -2.31
CDC42SE2Q9NRR3 AL391987.6-201ENST00000305671 199 ntBASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 SNORD115-3-201ENST00000363100 82 ntBASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 MIR95-201ENST00000385072 81 ntBASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 AC092634.2-201ENST00000428146 1010 ntBASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 RPL39P28-201ENST00000465655 155 ntBASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 AC018868.1-201ENST00000491307 315 ntBASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 AC108210.2-201ENST00000503681 201 ntBASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 SNORD19.2-201ENST00000516978 73 ntBASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 CYB5AP5-201ENST00000549779 389 ntBASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 AC004217.3-201ENST00000551552 878 ntBASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 AC015712.3-201ENST00000559380 164 ntBASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 AC079148.1-201ENST00000565944 819 ntBASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 NIFKP6-201ENST00000598115 845 ntBASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 AC010900.2-201ENST00000604508 210 ntBASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 AC079610.2-201ENST00000604818 690 ntBASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 AL355472.4-201ENST00000610233 626 ntBASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
CDC42SE2Q9NRR3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.61□□□□□ -2.31
CDC42SE2Q9NRR3 OR5T3-201ENST00000303059 1023 ntBASIC0.61□□□□□ -2.31
CDC42SE2Q9NRR3 RNU6-1339P-201ENST00000363574 91 ntBASIC0.61□□□□□ -2.31
CDC42SE2Q9NRR3 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.61□□□□□ -2.31
CDC42SE2Q9NRR3 AL135790.2-201ENST00000437701 267 ntBASIC0.61□□□□□ -2.31
CDC42SE2Q9NRR3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.61□□□□□ -2.31
CDC42SE2Q9NRR3 RPS27P1-201ENST00000450552 247 ntBASIC0.61□□□□□ -2.31
CDC42SE2Q9NRR3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.61□□□□□ -2.31
CDC42SE2Q9NRR3 RPL30P7-201ENST00000479312 323 ntBASIC0.61□□□□□ -2.31
CDC42SE2Q9NRR3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms