Protein–RNA interactions for Protein: Q9NQ69

LHX9, LIM/homeobox protein Lhx9, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9Q9NQ69 AC022616.6-201ENST00000520479 119 ntBASIC2.12□□□□□ -2.07
LHX9Q9NQ69 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.12□□□□□ -2.07
LHX9Q9NQ69 AC107934.1-201ENST00000522215 217 ntBASIC2.12□□□□□ -2.07
LHX9Q9NQ69 DEFB108A-201ENST00000530110 222 ntBASIC2.12□□□□□ -2.07
LHX9Q9NQ69 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.12□□□□□ -2.07
LHX9Q9NQ69 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.12□□□□□ -2.07
LHX9Q9NQ69 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.12□□□□□ -2.07
LHX9Q9NQ69 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.12□□□□□ -2.07
LHX9Q9NQ69 U73023.1-201ENST00000603134 700 ntBASIC2.12□□□□□ -2.07
LHX9Q9NQ69 AC092354.1-201ENST00000606057 376 ntBASIC2.12□□□□□ -2.07
LHX9Q9NQ69 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.12□□□□□ -2.07
LHX9Q9NQ69 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.12□□□□□ -2.07
LHX9Q9NQ69 AC245517.5-201ENST00000611529 162 ntBASIC2.12□□□□□ -2.07
LHX9Q9NQ69 AC009831.4-201ENST00000620744 325 ntBASIC2.12□□□□□ -2.07
LHX9Q9NQ69 AC078883.4-201ENST00000623218 367 ntBASIC2.12□□□□□ -2.07
LHX9Q9NQ69 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.12□□□□□ -2.07
LHX9Q9NQ69 AC110994.2-201ENST00000635481 492 ntBASIC2.12□□□□□ -2.07
LHX9Q9NQ69 OR5H6-203ENST00000642105 978 ntBASIC2.12□□□□□ -2.07
LHX9Q9NQ69 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LHX9Q9NQ69 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LHX9Q9NQ69 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
LHX9Q9NQ69 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
LHX9Q9NQ69 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
LHX9Q9NQ69 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
LHX9Q9NQ69 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LHX9Q9NQ69 RNU6-223P-201ENST00000362830 107 ntBASIC2.11□□□□□ -2.07
LHX9Q9NQ69 RNU5E-5P-201ENST00000365379 116 ntBASIC2.11□□□□□ -2.07
LHX9Q9NQ69 MIR627-201ENST00000384979 97 ntBASIC2.11□□□□□ -2.07
LHX9Q9NQ69 SNORA26.8-201ENST00000391306 124 ntBASIC2.11□□□□□ -2.07
LHX9Q9NQ69 AL079342.1-201ENST00000401460 267 ntBASIC2.11□□□□□ -2.07
LHX9Q9NQ69 MIR1289-2-201ENST00000408360 111 ntBASIC2.11□□□□□ -2.07
LHX9Q9NQ69 MIR1290-201ENST00000408735 78 ntBASIC2.11□□□□□ -2.07
LHX9Q9NQ69 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.11□□□□□ -2.07
LHX9Q9NQ69 AL451054.2-201ENST00000420896 202 ntBASIC2.11□□□□□ -2.07
LHX9Q9NQ69 Z99497.1-201ENST00000421282 135 ntBASIC2.11□□□□□ -2.07
LHX9Q9NQ69 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.11□□□□□ -2.07
LHX9Q9NQ69 AL356583.2-201ENST00000426536 280 ntBASIC2.11□□□□□ -2.07
LHX9Q9NQ69 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.11□□□□□ -2.07
LHX9Q9NQ69 AL356867.1-201ENST00000429623 299 ntBASIC2.11□□□□□ -2.07
LHX9Q9NQ69 HMGN2P3-201ENST00000433603 273 ntBASIC2.11□□□□□ -2.07
LHX9Q9NQ69 HMGN2P5-201ENST00000436882 273 ntBASIC2.11□□□□□ -2.07
LHX9Q9NQ69 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.11□□□□□ -2.07
LHX9Q9NQ69 RPS27AP8-201ENST00000452665 445 ntBASIC2.11□□□□□ -2.07
LHX9Q9NQ69 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.11□□□□□ -2.07
LHX9Q9NQ69 AL031183.1-201ENST00000457667 207 ntBASIC2.11□□□□□ -2.07
LHX9Q9NQ69 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.11□□□□□ -2.07
LHX9Q9NQ69 AC109486.1-201ENST00000486833 374 ntBASIC2.11□□□□□ -2.07
LHX9Q9NQ69 RPL30P5-201ENST00000494923 336 ntBASIC2.11□□□□□ -2.07
LHX9Q9NQ69 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.11□□□□□ -2.07
LHX9Q9NQ69 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.11□□□□□ -2.07
LHX9Q9NQ69 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LHX9Q9NQ69 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.11□□□□□ -2.07
LHX9Q9NQ69 AP003181.2-201ENST00000528941 181 ntBASIC2.11□□□□□ -2.07
LHX9Q9NQ69 AP000867.2-201ENST00000532468 320 ntBASIC2.11□□□□□ -2.07
LHX9Q9NQ69 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.11□□□□□ -2.07
LHX9Q9NQ69 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.11□□□□□ -2.07
LHX9Q9NQ69 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.11□□□□□ -2.07
LHX9Q9NQ69 MIR3146-201ENST00000580367 79 ntBASIC2.11□□□□□ -2.07
LHX9Q9NQ69 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.11□□□□□ -2.07
LHX9Q9NQ69 MIR4293-201ENST00000584305 78 ntBASIC2.11□□□□□ -2.07
LHX9Q9NQ69 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.11□□□□□ -2.07
LHX9Q9NQ69 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.11□□□□□ -2.07
LHX9Q9NQ69 AC012065.4-201ENST00000602445 679 ntBASIC2.11□□□□□ -2.07
LHX9Q9NQ69 AC025811.1-201ENST00000604312 472 ntBASIC2.11□□□□□ -2.07
LHX9Q9NQ69 AP000860.1-201ENST00000605250 559 ntBASIC2.11□□□□□ -2.07
LHX9Q9NQ69 AC090970.3-201ENST00000612566 866 ntBASIC2.11□□□□□ -2.07
LHX9Q9NQ69 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
LHX9Q9NQ69 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.11□□□□□ -2.07
LHX9Q9NQ69 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.1□□□□□ -2.07
LHX9Q9NQ69 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.1□□□□□ -2.07
LHX9Q9NQ69 SDAD1P2-201ENST00000441308 2028 ntBASIC2.1□□□□□ -2.07
LHX9Q9NQ69 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.1□□□□□ -2.07
LHX9Q9NQ69 RNU6-270P-201ENST00000364131 105 ntBASIC2.1□□□□□ -2.07
LHX9Q9NQ69 RNY3P13-201ENST00000365542 102 ntBASIC2.1□□□□□ -2.07
LHX9Q9NQ69 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LHX9Q9NQ69 SNORA1.3-201ENST00000384676 136 ntBASIC2.1□□□□□ -2.07
LHX9Q9NQ69 RNU6-278P-201ENST00000390945 109 ntBASIC2.1□□□□□ -2.07
LHX9Q9NQ69 RN7SKP32-201ENST00000410167 303 ntBASIC2.1□□□□□ -2.07
LHX9Q9NQ69 Z85995.1-201ENST00000415547 335 ntBASIC2.1□□□□□ -2.07
LHX9Q9NQ69 AC009518.2-201ENST00000418056 731 ntBASIC2.1□□□□□ -2.07
LHX9Q9NQ69 BTF3L4P3-201ENST00000418879 476 ntBASIC2.1□□□□□ -2.07
LHX9Q9NQ69 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.1□□□□□ -2.07
LHX9Q9NQ69 AL353777.1-201ENST00000425552 326 ntBASIC2.1□□□□□ -2.07
LHX9Q9NQ69 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.1□□□□□ -2.07
LHX9Q9NQ69 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.1□□□□□ -2.07
LHX9Q9NQ69 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.1□□□□□ -2.07
LHX9Q9NQ69 AL512844.2-201ENST00000433990 593 ntBASIC2.1□□□□□ -2.07
LHX9Q9NQ69 PIGFP3-201ENST00000441918 722 ntBASIC2.1□□□□□ -2.07
LHX9Q9NQ69 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.1□□□□□ -2.07
LHX9Q9NQ69 CBWD4P-201ENST00000445695 655 ntBASIC2.1□□□□□ -2.07
LHX9Q9NQ69 USP9YP12-201ENST00000450481 570 ntBASIC2.1□□□□□ -2.07
LHX9Q9NQ69 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.1□□□□□ -2.07
LHX9Q9NQ69 RPL23AP41-201ENST00000484754 458 ntBASIC2.1□□□□□ -2.07
LHX9Q9NQ69 AC112204.1-201ENST00000502591 103 ntBASIC2.1□□□□□ -2.07
LHX9Q9NQ69 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.1□□□□□ -2.07
LHX9Q9NQ69 RNU6-201P-201ENST00000517100 61 ntBASIC2.1□□□□□ -2.07
LHX9Q9NQ69 HSPE1P18-201ENST00000517602 280 ntBASIC2.1□□□□□ -2.07
LHX9Q9NQ69 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.1□□□□□ -2.07
LHX9Q9NQ69 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.1□□□□□ -2.07
LHX9Q9NQ69 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms