Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 SCARNA4-201ENST00000629045 128 ntBASIC4.8□□□□□ -1.64
NEUROD4Q9HD90 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NEUROD4Q9HD90 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.8□□□□□ -1.64
NEUROD4Q9HD90 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NEUROD4Q9HD90 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
NEUROD4Q9HD90 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NEUROD4Q9HD90 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.8□□□□□ -1.64
NEUROD4Q9HD90 BX322639.1-202ENST00000423987 2213 ntBASIC4.8□□□□□ -1.64
NEUROD4Q9HD90 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
NEUROD4Q9HD90 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NEUROD4Q9HD90 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
NEUROD4Q9HD90 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.79□□□□□ -1.64
NEUROD4Q9HD90 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
NEUROD4Q9HD90 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NEUROD4Q9HD90 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NEUROD4Q9HD90 RNU6-879P-201ENST00000364328 108 ntBASIC4.79□□□□□ -1.64
NEUROD4Q9HD90 Y_RNA.446-201ENST00000384178 104 ntBASIC4.79□□□□□ -1.64
NEUROD4Q9HD90 BTF3L4P2-201ENST00000392798 346 ntBASIC4.79□□□□□ -1.64
NEUROD4Q9HD90 RNU6-1135P-201ENST00000411083 103 ntBASIC4.79□□□□□ -1.64
NEUROD4Q9HD90 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.79□□□□□ -1.64
NEUROD4Q9HD90 AC007919.1-201ENST00000429380 217 ntBASIC4.79□□□□□ -1.64
NEUROD4Q9HD90 AC073850.1-201ENST00000449243 255 ntBASIC4.79□□□□□ -1.64
NEUROD4Q9HD90 AP000870.1-201ENST00000472927 406 ntBASIC4.79□□□□□ -1.64
NEUROD4Q9HD90 RPL26P26-201ENST00000480251 434 ntBASIC4.79□□□□□ -1.64
NEUROD4Q9HD90 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.79□□□□□ -1.64
NEUROD4Q9HD90 RNA5SP165-201ENST00000517142 115 ntBASIC4.79□□□□□ -1.64
NEUROD4Q9HD90 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.79□□□□□ -1.64
NEUROD4Q9HD90 MIR3691-201ENST00000578066 90 ntBASIC4.79□□□□□ -1.64
NEUROD4Q9HD90 AC015914.2-201ENST00000618167 288 ntBASIC4.79□□□□□ -1.64
NEUROD4Q9HD90 AC112200.1-201ENST00000625015 234 ntBASIC4.79□□□□□ -1.64
NEUROD4Q9HD90 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NEUROD4Q9HD90 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NEUROD4Q9HD90 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NEUROD4Q9HD90 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
NEUROD4Q9HD90 AC009541.1-201ENST00000438279 2662 ntBASIC4.79□□□□□ -1.64
NEUROD4Q9HD90 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NEUROD4Q9HD90 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NEUROD4Q9HD90 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 RNU6-923P-201ENST00000364753 107 ntBASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 MIR32-201ENST00000384965 70 ntBASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 MIR607-201ENST00000385241 96 ntBASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 Y_RNA.590-201ENST00000410140 107 ntBASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 RNU2-61P-201ENST00000411069 191 ntBASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 CYP4F29P-201ENST00000420685 446 ntBASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 DDX39BP1-205ENST00000422507 192 ntBASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 RPL21P66-201ENST00000426566 466 ntBASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 RPS15AP7-201ENST00000439294 405 ntBASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 RPS29P9-201ENST00000440360 171 ntBASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 RPL7AP61-201ENST00000443410 636 ntBASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 AL078601.1-201ENST00000444542 271 ntBASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 ANP32BP2-201ENST00000454525 545 ntBASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 Y_RNA.638-201ENST00000459374 113 ntBASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 H3F3AP1-201ENST00000559984 334 ntBASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 MIR4436B2-201ENST00000581415 91 ntBASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 MIR4436B1-201ENST00000583272 91 ntBASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 AP002799.1-201ENST00000623552 423 ntBASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 AL079305.1-201ENST00000623159 3008 ntBASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NEUROD4Q9HD90 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
NEUROD4Q9HD90 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
NEUROD4Q9HD90 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
NEUROD4Q9HD90 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
NEUROD4Q9HD90 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
NEUROD4Q9HD90 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
NEUROD4Q9HD90 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.77□□□□□ -1.65
NEUROD4Q9HD90 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
NEUROD4Q9HD90 SNORA31-201ENST00000362607 130 ntBASIC4.77□□□□□ -1.65
NEUROD4Q9HD90 RNU6-105P-201ENST00000363909 104 ntBASIC4.77□□□□□ -1.65
NEUROD4Q9HD90 RNA5SP189-201ENST00000364920 115 ntBASIC4.77□□□□□ -1.65
NEUROD4Q9HD90 RNU6-72P-201ENST00000384285 79 ntBASIC4.77□□□□□ -1.65
NEUROD4Q9HD90 RNU6-843P-201ENST00000384454 104 ntBASIC4.77□□□□□ -1.65
NEUROD4Q9HD90 RNU6-1081P-201ENST00000384537 107 ntBASIC4.77□□□□□ -1.65
NEUROD4Q9HD90 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NEUROD4Q9HD90 SNORD12B-201ENST00000410433 91 ntBASIC4.77□□□□□ -1.65
NEUROD4Q9HD90 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.77□□□□□ -1.65
NEUROD4Q9HD90 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NEUROD4Q9HD90 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.77□□□□□ -1.65
NEUROD4Q9HD90 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.77□□□□□ -1.65
NEUROD4Q9HD90 AL031659.1-201ENST00000447075 539 ntBASIC4.77□□□□□ -1.65
NEUROD4Q9HD90 AL354714.3-201ENST00000447284 493 ntBASIC4.77□□□□□ -1.65
NEUROD4Q9HD90 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.77□□□□□ -1.65
NEUROD4Q9HD90 AP001025.1-201ENST00000486139 332 ntBASIC4.77□□□□□ -1.65
NEUROD4Q9HD90 AF186996.7-201ENST00000492781 209 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms